Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1442 ATGCCTATCGGTCATACTGTCGTTTTTCAATTTCGGGCGTGGTTCAATTTTCATGAAGAATTTTTCTTCCTGTTCCTCTTACCTCCCATTATATTTCAGTCTGGTTTCAGTCTCTCACCTAAACCTTTCTTCTCAAATTTTGGAGCAATTGTGACATTTGCTATATTTGGTACCTTTATTGCTTCAGTAGTCACGGGTGTTTTAGTTTATCTTGGTGGTTTACTCTACCTCATGTATAAACTTCCTTTTGTGGAATGCCTAATGTTTGGTGCTCTAATATCAGCAACTGATCCTGTTACTGTTCTATCCATATTTCAGGAACTTGGCACAGATGTTAACCTATATGCCTTGGTGTTTGGTGAATCAGTCTTGAATGATGCAATAGCAATTTCCTTGTACAGGACGATGTCATCAGTCAAAACCAACTATTCTGGACAAAATTTCTTCATGGTGGTTGTGAGATTTTTGGAAACTTTTGTTGGTTCGATGTCTTCAGGTGTTGGAGTTGGATTTACATCTGCTTTGCTTTTTAAGTATGCAGGATTGGATATTGACAATCTGCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCATATTTCTCGTACATGCTTTCAGAAGGTCTTGGTTTGTCTGGTATTGTATCGATACTGTTTACGGGAATGGTTATGAAGCATTACACATATTCCAATTTGTCAGAAAGTTCTCAAAGATTTGTCTCTGCATTTTTCCATTTAATATCATCATTGGCAGAAACATTTATATTCATATACATGGGATTTGATATTGCTATGGAACAACATAGCTGGTCACATGTTGGATTCATATTCTTCTCCATTATATTTATTGGGGTTGCAAGGGCAGCAAATGTCTTCTCTTGTGCTTATTTGGTCAATTTGGTCAGACCTGCAAATCAGAAGATACCTCCAAAACATCAGAAAGCACTTTGGTACAGTGGACTTCGAGGGGCAATGGCATTTGCCCTTGCTCTGCAGTCAGTTCATGATCTTCCAGAAGGACATGGGCAGACTATTTTCACTGCAACTACAGCTATAGTTGTTCTAACGGTGTTACTGATTGGTGGTTCAACAGGGACCATGCTGGAAGCCCTAGAAGTTGTTGGTGACAGCCATAACATTGACAATGCTTTGAGTCCAGTTGGCAACATCAATAATTTTGAAGGAAATCATGGTTATATTGCTCCCTCGTATGATGAAGAATCTTCTTCAGGCAACAAAATCAAAATGAAATTGAAAGAGTTTCATAGGAGTGCTGCGTCTTTTACGGCTTTAGATAAAAATTATCTCACCCCATTCTTTACAAGTCAAAATGGAGATGAAGATGATGAAGAAGAACCTTTTACTTCAAGGAGGAGCTTCCAGGGCAACGACCATTATTATAGTAATTCTCGCTGA 1416 0.3849 MPIGHTVVFQFRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFAIFGTFIASVVTGVLVYLGGLLYLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAIAISLYRTMSSVKTNYSGQNFFMVVVRFLETFVGSMSSGVGVGFTSALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLSEGLGLSGIVSILFTGMVMKHYTYSNLSESSQRFVSAFFHLISSLAETFIFIYMGFDIAMEQHSWSHVGFIFFSIIFIGVARAANVFSCAYLVNLVRPANQKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEVVGDSHNIDNALSPVGNINNFEGNHGYIAPSYDEESSSGNKIKMKLKEFHRSAASFTALDKNYLTPFFTSQNGDEDDEEEPFTSRRSFQGNDHYYSNSR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1442 471 Pfam Sodium/hydrogen exchanger family 18 369 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci3g1442 471 Gene3D - 83 135 - -
Prci3g1442 471 MobiDBLite consensus disorder prediction 440 471 - -
Prci3g1442 471 PRINTS Na+/H+ exchanger signature 35 49 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g1442 471 PRINTS Na+/H+ exchanger signature 50 58 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g1442 471 PRINTS Na+/H+ exchanger signature 90 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g1442 471 PRINTS Na+/H+ exchanger signature 21 32 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g1442 471 PANTHER SODIUM/HYDROGEN EXCHANGER 14 455 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Prci3g1442 471 NCBIfam sodium/hydrogen exchanger 3 14 378 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1442 Prci-Chr3 23804386 23813025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1442 17 453 Antiporters AT5G55470 31.847 2.39e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1442 K14724 - gmx:100790830 724.546