Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1398 ATGGAACCAATCAATGGAGGGAACAGTTTCGCAAACAATTCCAATCTGAGCTCAAAGCAACGGCTACGCTGGACACATGAGCTCCACGAACGCTTTGTTGATGCTGTGGCGCAGCTTGGTGGGCCTGATCGTGCCACACCAAAAGGTGTCCTTAGAGTGATGGGTGTACAAGGCTTAACAATATATCACGTCAAAAGCCATCTGCAGAAATATCGTCTTGCTAAATACCTCCCTGACTCCTCATTTGATGGGAAAAAAGCCGACAAGAAAGAAACAGGGGATATGCTTTCCAATCTAGATGGTTCACCAGGGATGCAGATTACTGAAGCTCTAAAGCTGCAAATGGAGGTGCAGAAGCGATTACATGAGCAATTGGAGGTTCAGAGACAGCTACAACTTCGGATTGAAGCCCAGGGCAAATACTTGAAGAAGATAATTGAAGAACACCAGCGGCTCAGTGGTGTTCTTTCCCAAGCACCCGGCTCAGGGGATGCAGACTCAGTGCCAGGTGACGCCTGCCAAGACCCTGACAATGAGAATGACCCATCAACTCCTGCCCCTACATCTGAGTGCCCCCTTCAGGAAAAAGCTACTAAAGAACGTGCTCCGGCAAAGAGTCTCTCAATCGACGAATCCTTTTCATCCCACAACGAACCATTAACGCCTGATTCTGGCTGCCCTGCTGGTTCCCCTATCAATAGCCCTAGAGAGAAGAGGATGATAAAAAAGCAAAGGGTGAGCTTGGAAGGAGCATTTTCTAAAGCAGAAATGGTGCTTCCACATCATATACTTGAGTCAAGCATGTCATCAAGTCAGCAATTGAACAGTGTGTTTCCTACGCTGGAGCAGTTTGATCCTTCACTAGGAATATCTACCAGAAGTGACGGGGAACTGAAGAAGGTTGGCGGGGGAAATCTGTGA 921 0.4777 MEPINGGNSFANNSNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSFDGKKADKKETGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEHQRLSGVLSQAPGSGDADSVPGDACQDPDNENDPSTPAPTSECPLQEKATKERAPAKSLSIDESFSSHNEPLTPDSGCPAGSPINSPREKRMIKKQRVSLEGAFSKAEMVLPHHILESSMSSSQQLNSVFPTLEQFDPSLGISTRSDGELKKVGGGNL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1398 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
Prci3g1398 306 FunFam Myb family transcription factor 18 76 - -
Prci3g1398 306 Pfam MYB-CC type transfactor, LHEQLE motif 105 151 IPR025756 -
Prci3g1398 306 MobiDBLite consensus disorder prediction 155 243 - -
Prci3g1398 306 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Prci3g1398 306 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Prci3g1398 306 Coils Coil 108 128 - -
Prci3g1398 306 MobiDBLite consensus disorder prediction 285 306 - -
Prci3g1398 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 18 291 IPR044848 GO:0003700
Prci3g1398 306 Gene3D - 18 77 - -
Prci3g1398 306 MobiDBLite consensus disorder prediction 177 191 - -
Prci3g1398 306 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 74 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1398 Prci-Chr3 23028257 23033496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1398 54 306 G2-like Transcription Factor Family AT2G01060 62.353 2.88e-96 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g1398 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1398 - - gmx:100786925 457.603