Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1396 ATGTATCAACGAAACAGTGTCCCTAGTTTAAGTCTACTTGGAAGCAACACATTGGTGCATGGTCAGCAGTTTGATTGTGGTGGAAGTACAATGGAACCAATCAATGGAGGGAACAGTTTCGCAAACAATTCCAATCTGAGCTCAAAGCAACGGCTACGCTGGACACATGAGCTCCACGAACGCTTTGTTGATGCTGTGGCGCAGCTTGGTGGGCCTGATCGTGCCACACCAAAAGGTGTCCTTAGAGTGATGGGTGTACAAGGCTTAACAATATATCACGTCAAAAGCCATCTGCAGAAATATCGTCTTGCTAAATACCTCCCTGACTCCTCATTTGATGGGAAAAAAGCCGACAAGAAAGAAACAGGGGATATGCTTTCCAATCTAGATGGTTCACCAGGGATGCAGATTACTGAAGCTCTAAAGCTGCAAATGGAGGTGCAGAAGCGATTACATGAGCAATTGGAGGTTCAGAGACAGCTACAACTTCGGATTGAAGCCCAGGGCAAATACTTGAAGAAGATAATTGAAGAACACCAGCGGCTCAGTGGTGTTCTTTCCCAAGCACCCGGCTCAGGGGATGCAGACTCAGTGCCAGGTGACGCCTGCCAAGACCCTGACAATGAGAATGACCCATCAACTCCTGCCCCTACATCTGAGTGCCCCCTTCAGGAAAAAGCTACTAAAGAACGTGCTCCGGCAAAGAGTCTCTCAATCGACGAATCCTTTTCATCCCACAACGAACCATTAACGCCTGATTCTGGCTGCCCTGCTGGTTCCCCTATCAATAGCCCTAGAGAGAAGAGGATGATAAAAAAGCAAAGGGTGAGCTTGGAAGGAGCATTTTCTAAAGCAGAAATGGTGCTTCCACATCATATACTTGAGTCAAGCATGTCATCAAGTCAGCAATTGAACAGTGTGTTTCCTACGCTGGAGCAGTTTGATCCTTCACTAGGAATATCTACCAGAAGTGACGGGGAACTGAAGAAGGTTGGCGGGGGAAATCTGTGA 1011 0.4728 MYQRNSVPSLSLLGSNTLVHGQQFDCGGSTMEPINGGNSFANNSNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSFDGKKADKKETGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEHQRLSGVLSQAPGSGDADSVPGDACQDPDNENDPSTPAPTSECPLQEKATKERAPAKSLSIDESFSSHNEPLTPDSGCPAGSPINSPREKRMIKKQRVSLEGAFSKAEMVLPHHILESSMSSSQQLNSVFPTLEQFDPSLGISTRSDGELKKVGGGNL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1396 336 FunFam Myb family transcription factor 48 106 - -
Prci3g1396 336 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Prci3g1396 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Prci3g1396 336 MobiDBLite consensus disorder prediction 185 273 - -
Prci3g1396 336 MobiDBLite consensus disorder prediction 315 336 - -
Prci3g1396 336 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 47 321 IPR044848 GO:0003700
Prci3g1396 336 Gene3D - 48 107 - -
Prci3g1396 336 Coils Coil 138 158 - -
Prci3g1396 336 Pfam MYB-CC type transfactor, LHEQLE motif 135 181 IPR025756 -
Prci3g1396 336 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Prci3g1396 336 MobiDBLite consensus disorder prediction 207 221 - -
Prci3g1396 336 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1396 Prci-Chr3 23028252 23033496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1396 84 336 G2-like Transcription Factor Family AT2G01060 62.353 1.07e-95 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g1396 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1396 - - gmx:100786925 498.434