Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1395 ATGATATCTGTCCCTAGTTTAAGTCTACTTGGAAGCAACACATTGGTGCATGGTCAGCAGTTTGATTGTGGTGGAAGTACAATGGAACCAATCAATGGAGGGAACAGTTTCGCAAACAATTCCAATCTGAGCTCAAAGCAACGGCTACGCTGGACACATGAGCTCCACGAACGCTTTGTTGATGCTGTGGCGCAGCTTGGTGGGCCTGATCGTGCCACACCAAAAGGTGTCCTTAGAGTGATGGGTGTACAAGGCTTAACAATATATCACGTCAAAAGCCATCTGCAGAAATATCGTCTTGCTAAATACCTCCCTGACTCCTCATTTGATGGGAAAAAAGCCGACAAGAAAGAAACAGGGGATATGCTTTCCAATCTAGATGGTTCACCAGGGATGCAGATTACTGAAGCTCTAAAGCTGCAAATGGAGGTGCAGAAGCGATTACATGAGCAATTGGAGGTTCAGAGACAGCTACAACTTCGGATTGAAGCCCAGGGCAAATACTTGAAGAAGATAATTGAAGAACACCAGCGGCTCAGTGGTGTTCTTTCCCAAGCACCCGGCTCAGGGGATGCAGACTCAGTGCCAGGTGACGCCTGCCAAGACCCTGACAATGAGAATGACCCATCAACTCCTGCCCCTACATCTGAGTGCCCCCTTCAGGAAAAAGCTACTAAAGAACGTGCTCCGGCAAAGAGTCTCTCAATCGACGAATCCTTTTCATCCCACAACGAACCATTAACGCCTGATTCTGGCTGCCCTGCTGGTTCCCCTATCAATAGCCCTAGAGAGAAGAGGATGATAAAAAAGCAAAGGGTGAGCTTGGAAGGAGCATTTTCTAAAGCAGAAATGGTGCTTCCACATCATATACTTGAGTCAAGCATGTCATCAAGTCAGCAATTGAACAGTGTGTTTCCTACGCTGGAGCAGTTTGATCCTTCACTAGGAATATCTACCAGAAGTGACGGGGAACTGAAGAAGGTTGGCGGGGGAAATCTGTGA 1002 0.4731 MISVPSLSLLGSNTLVHGQQFDCGGSTMEPINGGNSFANNSNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSFDGKKADKKETGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEHQRLSGVLSQAPGSGDADSVPGDACQDPDNENDPSTPAPTSECPLQEKATKERAPAKSLSIDESFSSHNEPLTPDSGCPAGSPINSPREKRMIKKQRVSLEGAFSKAEMVLPHHILESSMSSSQQLNSVFPTLEQFDPSLGISTRSDGELKKVGGGNL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1395 333 Gene3D - 45 104 - -
Prci3g1395 333 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Prci3g1395 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Prci3g1395 333 Pfam MYB-CC type transfactor, LHEQLE motif 132 178 IPR025756 -
Prci3g1395 333 MobiDBLite consensus disorder prediction 204 218 - -
Prci3g1395 333 Coils Coil 135 155 - -
Prci3g1395 333 FunFam Myb family transcription factor 45 103 - -
Prci3g1395 333 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Prci3g1395 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 44 318 IPR044848 GO:0003700
Prci3g1395 333 MobiDBLite consensus disorder prediction 312 333 - -
Prci3g1395 333 MobiDBLite consensus disorder prediction 182 269 - -
Prci3g1395 333 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1395 Prci-Chr3 23028252 23033496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1395 81 333 G2-like Transcription Factor Family AT2G01060 62.353 1.06e-95 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g1395 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1395 - - gmx:100786925 494.197