Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1392 ATGTATCCCAGACTAATACACTCACACGAAGGGATGGTTGGTCAGGAAGACATGCAGGGTGGGTCCAACCATGGCCTCAACAACAACGGAGACCCTTGTCTGGTGTTGACCGCCGATCCCAAACCTCGTCTCCGCTGGACCCAGGACCTCCATGAACGATTCGTCGATGCTGTTACTCAGCTTGGGGGCGCCAGCAAAGCTACACCAAAAGCAATCATGCGAACCATGAATGTAAAGGGTTTGACTTTATTTCATTTGAAGAGTCATCTTCAGAAATACAGACTTGGCAAGCAATCAGGCAAAGATATGGTTGAAGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTGGTGCTGATAACTCTTCCCCAAAGTTGCCAACTACTGATACAAATGAGGGTCATGAAATCAAGGAGGCTTTAAGGGTACAGATGGAAGTGCAAAGTAAACTACATTTGCAAGTAGAGGCAGAGAAGCATTTGCAGATTCGCCAGGATGCAGAGCAAAGATACATGGCCATGCTCGAAAGAGCCTGCAAGATGCTTGCTGATCAGTTTATTGGTGCTACGGTTATAGACACAGACAGCCAAAAATTTCAAGGACATGGATGTAAAGCACCAAGAGGTCCCTTTGTTGACCCTCTTGGCTTTTACTCATTACCATCTACTGGCACAACCGGAGCAGTTCAGGCGCCTAGAGAAGAATTACCAAATCTTCATTCCCAAAGGGCTGATTGTTCAACCGAAAGTTGCCTAACATCGCACGAGAGTCCTGGAGGTTTGACACTAGAAGGATCTCCCATTAGTGGGGCAAACAAGAGGATACTGAGCTTGGAATCCATGGCAGCAACCCCTTTGATCTGGAGCGAAGCCTCCATGAGAACTCAAGGCATAAATGTGGCCCAAGGTAACCTGCATGGAATAACTAGGTATGGAATGTAG 942 0.4682 MYPRLIHSHEGMVGQEDMQGGSNHGLNNNGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMVEGCKDGSYLLESPGADNSSPKLPTTDTNEGHEIKEALRVQMEVQSKLHLQVEAEKHLQIRQDAEQRYMAMLERACKMLADQFIGATVIDTDSQKFQGHGCKAPRGPFVDPLGFYSLPSTGTTGAVQAPREELPNLHSQRADCSTESCLTSHESPGGLTLEGSPISGANKRILSLESMAATPLIWSEASMRTQGINVAQGNLHGITRYGM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1392 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 41 96 IPR006447 GO:0003677
Prci3g1392 313 Gene3D - 40 98 - -
Prci3g1392 313 MobiDBLite consensus disorder prediction 116 130 - -
Prci3g1392 313 MobiDBLite consensus disorder prediction 1 26 - -
Prci3g1392 313 MobiDBLite consensus disorder prediction 111 132 - -
Prci3g1392 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 98 IPR017930 -
Prci3g1392 313 Pfam MYB-CC type transfactor, LHEQLE motif 136 181 IPR025756 -
Prci3g1392 313 Pfam Myb-like DNA-binding domain 44 94 IPR001005 -
Prci3g1392 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 259 IPR044848 GO:0003700
Prci3g1392 313 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
Prci3g1392 313 FunFam Myb family transcription factor 40 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1392 Prci-Chr3 22999506 23004801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1392 20 274 G2-like Transcription Factor Family AT3G24120 44.118 1.96e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g1392 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1392 - - gmx:100786397 503.056