Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1389 ATGGAGAAGCACAAGGAGAAGCAGAGATCATCTGCTAATGATGATCATAATGCTGGTGGATTAGCATTCGTTTCCTTTTATTCAGAAGATAGCAGGGAATCTGTGGACAAGTGGATGGCATTTCCTAGCAAATCAAATTTTGCCAATTCTAGCAACTCAGCGAATATGGATGATTTTGGGGCTAAGAATGAAAAGAAAGACAGTGATGCAAGGGAGCGTCTGAACGAGCAAAAGCCTTTGGATCATCAAATTTTAACTGAAGCAAGCATAGCTGAGAGAACTGCTGAATGGGGCCTTGTGATGAACTCAGGTAGTTTTAAAGCAATAGAAGGAGTGACAACCAGTTCCTCCTTCGATGGTGAAAGAGGCAAAAATTTGTCAGATAGATTTACTGCAGCAGTATCAACAAGGACATCTGAGGAATCAAATTATGGGTCAGAGTCATCATCGGGGGCATTTCCAAGGGTATCACAAGAGTTGAAGGAAGCCTTGGCGTCACTACAACAGACATTTGTTGTCTCAGATGCAACTAAACCAGACTGCCCCATAATGTATGCCAGCAGTGGATTTTTCGGTATGACAGGTTATTCTTCAAAGGAGGTCATTGGAAGGAATTGCCGGTTTCTTCAGGGTCCCGAAACAGACCAGAAAGAAGTAGCCAAAATTCGAGATGCAGTTAAGAATGGGAAAAGCTATTGTGGCAGGCTTTTAAACTACAAGAAAGATGGAACCCCATTCTGGAATCTTCTCACTGTCACTCCTATAAGAGATAGCCAGGGCAATGTCATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAATACACTGAAGGCATAAATGAAAAGGCATTACGGCCAAATGGATTGCCTAAGTCATTAATTCGTTATGATGCCCGTCAGAAGGAGAAAGCTTTGGGTTCCATCACAGAGGTTGTCCATACTGTCAAGGACCCAAAATCCATCATTCGGTCTGTGAGCCATGATAATGCCAGTAAGGTTGAAGAGCTAGAAAAAATCAGTTCTGATTTTGTTTTGCCAAAGTCTGTTGAAATCGAGAGTACTAGTTCAACAAAGAGACAAACTACTTCACTAGACTTCCAAGGTGATAAAAGCAAAAGGAAGTCAGGGCGCATTTCTTTCATAAGTTTCAAAGGGAGATCTCAAAGCTCTACAGGGAAGCATGATGAAAAGCCCATTGTTGAGCCAGAGGTTTTGATGACTAAGGACATGGAATGTTCTGACAGTTGGGAGCGTCTTCAAAGGGAAAGGGATATACGGCAGGGAATTGATCTAGCAACCACATTGGAGCGTATTGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGATAACCCAATCATATTTGCATCCGATAGCTTTCTTGAACTTACAGAATATACGCGAGAAGAAATTTTGGGAAGAAACTGTCGGTTTCTTCAAGGACCAGAAACAGATCAAGCAACTGTCGCAAAGATCAGAGATGCTATCAGAGAACAGAGGGAAATCACTGTTCAGCTGATCAACTATACCAAGAGTGGAAAGAAGTTCTGGAATTTGTTCCACTTGCAGCCTATGCGTGATCAAAAGGGTGAGCTTCAATACTTTATAGGCGTCCAATTGGATGGAAGTGATCATGTAGAACCTTTAAGAAACCGCCTATCTGAGAAAACAGAGCAACAAAGTTCTAAATTGGTCAAAGCAACTGCAGAAAATGTTGATGAGGCTGTCCGGGAGCTTCCTGATGCCAACTTGAGACCGGAAGATTTGTGGGCAATTCATTCTCAGCCTGTCTTACCAAGACCTCATAAAAAGGAAAGTTCTTCTTGGATGGCAATACAGAAGTTAACTGCAAGTGGTGAAAAAATTGGACTGCATCATTTTATGCCAATAAGGCCATTGGGTTGTGGAGATACTGGCAGTGTTCACCTTGTGGAGCTTCAAGGTGCAGGTGAACTATATGCAATGAAGGCAATGGAAAAATCAGTCTTGCTAAATCGTAATAAGGTTCATCGAGCATGCATTGAGAGAGAGATTATATCATTGCTGGACCATCCTTTTCTTCCCACTCTATACACTTCTTTTCAGACTTCTACACATGTATGTTTGATAACAGACTTTTACCCTGGTGGTGAATTGTTTGCATTGTTAGATAAGCAACCTATGAAGATTTTCAAGGAGGAATCGGCAAGATTCTATGCAGCAGAGGTTGTAATTGGTTTGGAATACCTCCATTGCTTAGGTATAATTTATCGAGACCTAAAGCCTGAAAATATTTTACTTCAGAAGGATGGCCATATTGTATTAACTGATTTTGATTTATCATTCATGACTTCTTGTAAACCCCAGATTGTGAAGCATCCTCCACCTCACAGAAGATCGCGGAGTCAACCACCGCCAACATTTGTTGCAGAGCCTAATACACAATCAAACTCCTTTGTCGGAACAGAAGAATACATAGCTCCTGAAATTATTACCGGATCTGGGCATAGCAGTGCTATAGATTGGTGGGCTCTTGGTATATTATTGTACGAAATGCTCTATGGTCGTACACCATTCAGGGGAAAGAATAGGCAGAGGACATTTGCCAACGTCTTGCACAAAGATCTAACCTTTCCAAGTAGCATCCCGGTAAGTCTTGCAGCCAGGCAGTTGATTAATGCACTATTGCAGAGAGATCCAGCCAACCGTTTAGGTTCAACTACTGGAGCTAATGAAATCAAACAACATCCCTTTTTCCGTGGAATTAATTGGCCTTTAATCCGTTGCATGAATCCACCACCTCTAGAGGCTCCTCTTAAATTGATAGGGAAAGATCCAATGCATAAAGAAGTGAAATGGGAAGATGATGGAGTGCTTGTTCGCTCAATGGATTTGGATATCTTCTGA 2889 0.4164 MEKHKEKQRSSANDDHNAGGLAFVSFYSEDSRESVDKWMAFPSKSNFANSSNSANMDDFGAKNEKKDSDARERLNEQKPLDHQILTEASIAERTAEWGLVMNSGSFKAIEGVTTSSSFDGERGKNLSDRFTAAVSTRTSEESNYGSESSSGAFPRVSQELKEALASLQQTFVVSDATKPDCPIMYASSGFFGMTGYSSKEVIGRNCRFLQGPETDQKEVAKIRDAVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIRDSQGNVIKFIGMQVEVSKYTEGINEKALRPNGLPKSLIRYDARQKEKALGSITEVVHTVKDPKSIIRSVSHDNASKVEELEKISSDFVLPKSVEIESTSSTKRQTTSLDFQGDKSKRKSGRISFISFKGRSQSSTGKHDEKPIVEPEVLMTKDMECSDSWERLQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVAKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSSKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVLPRPHKKESSSWMAIQKLTASGEKIGLHHFMPIRPLGCGDTGSVHLVELQGAGELYAMKAMEKSVLLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTSTHVCLITDFYPGGELFALLDKQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHIVLTDFDLSFMTSCKPQIVKHPPPHRRSRSQPPPTFVAEPNTQSNSFVGTEEYIAPEIITGSGHSSAIDWWALGILLYEMLYGRTPFRGKNRQRTFANVLHKDLTFPSSIPVSLAARQLINALLQRDPANRLGSTTGANEIKQHPFFRGINWPLIRCMNPPPLEAPLKLIGKDPMHKEVKWEDDGVLVRSMDLDIF 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1389 962 Gene3D PAS domain 170 345 - -
Prci3g1389 962 SMART pac_2 233 275 IPR001610 -
Prci3g1389 962 SMART pac_2 504 546 IPR001610 -
Prci3g1389 962 SUPERFAMILY PYP-like sensor domain (PAS domain) 446 542 IPR035965 -
Prci3g1389 962 SMART serkin_6 628 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1389 962 Gene3D Phosphorylase Kinase; domain 1 627 711 - -
Prci3g1389 962 CDD STKc_phototropin_like 626 936 - -
Prci3g1389 962 CDD PAS 450 542 IPR000014 -
Prci3g1389 962 SUPERFAMILY Protein kinase-like (PK-like) 605 936 IPR011009 -
Prci3g1389 962 CDD PAS 183 272 IPR000014 -
Prci3g1389 962 MobiDBLite consensus disorder prediction 43 80 - -
Prci3g1389 962 ProSitePatterns Protein kinases ATP-binding region signature. 634 657 IPR017441 GO:0005524
Prci3g1389 962 Gene3D Transferase(Phosphotransferase) domain 1 712 923 - -
Prci3g1389 962 MobiDBLite consensus disorder prediction 133 152 - -
Prci3g1389 962 SUPERFAMILY PYP-like sensor domain (PAS domain) 177 269 IPR035965 -
Prci3g1389 962 ProSiteProfiles PAC domain profile. 230 284 IPR000700 -
Prci3g1389 962 FunFam LOV domain-containing protein 416 580 - -
Prci3g1389 962 Pfam Protein kinase domain 631 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1389 962 Gene3D PAS domain 416 580 - -
Prci3g1389 962 ProSiteProfiles PAC domain profile. 501 555 IPR000700 -
Prci3g1389 962 MobiDBLite consensus disorder prediction 43 58 - -
Prci3g1389 962 ProSiteProfiles PAS repeat profile. 156 229 IPR000014 -
Prci3g1389 962 MobiDBLite consensus disorder prediction 785 809 - -
Prci3g1389 962 FunFam LOV domain-containing protein 627 711 - -
Prci3g1389 962 Pfam PAS domain 450 542 IPR000014 -
Prci3g1389 962 Pfam PAS domain 177 273 IPR000014 -
Prci3g1389 962 SMART pas_2 429 498 IPR000014 -
Prci3g1389 962 SMART pas_2 158 227 IPR000014 -
Prci3g1389 962 ProSiteProfiles PAS repeat profile. 427 500 IPR000014 -
Prci3g1389 962 ProSiteProfiles Protein kinase domain profile. 628 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1389 962 MobiDBLite consensus disorder prediction 59 80 - -
Prci3g1389 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Prci3g1389 962 FunFam Putative LOV domain-containing protein 712 925 - -
Prci3g1389 962 FunFam Putative LOV domain-containing protein 170 326 - -
Prci3g1389 962 NCBIfam PAS domain S-box protein 453 545 IPR000014 -
Prci3g1389 962 NCBIfam PAS domain S-box protein 182 273 IPR000014 -
Prci3g1389 962 PANTHER FLIPPASE KINASE 1-RELATED 126 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1389 Prci-Chr3 22941303 22971236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1389 88 961 AGC Kinase Gene Family AT5G58140 75.170 0.0 1329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci3g1389 Pkinase 3.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1389 K20715 - gmx:100804783 1499.95