Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1386 ATGCATAACAGAAAAGAGCTTTGTAGAAATTTTCAGCGAGGCAGCTGCCAATATGGAGAAAGGTGTAGATTTCTTCACATGCTATCACAACAGCAAAAACAAACTGCCAATCCTTATGGATTTGGGTCTCATTCCAGTTCACACCAAAAACAAACTGCCAATCCTTTTGGATTTGGGTCCCTCTCCAGTTCACAGCAGCAGCATAGGACCAATCCTTTTGGATTTGGTGTCCAGAACAGCTCCCAGCCAACAGGGGGTGTTAATTCAGAGTTCAGACACCAGTTCAAGGTTCTTCCTCTTCCTATTATTGATGATGATTTACTTGTTGATCAGTCTTTTGAAAACAAATGGACTCGGCCTTCTTCCTCGCCCCAGAATAGTTCTTCGCGAAAAACTGATGCCAATTCTCAAACAGCGAACCATAAGTGCACAGATCCTGAAACTTGCAAACGTCAAATTGTAGAAGATTTTGAGCAAGAGAAACCACTTTGGAAGCTGACATGCTATGGTCATTGTAAAGGTGCTCCTTGTGACATTGTTGGTGATATTAGCTATGAAGAATTGCGGGCAGCTGCATATGAGGATGCTACGCATGGGATGGCCTTACAATCAATTGTTGAGAAGGAGAGAAATCTACTAAGTTCCAAGTTAATGGAGTTTCAGAACCTTCTTCGTGAACCTTACAAAATACAGCTGAATTCTTCTCTTGCAAGTGATAAGCATCAATCTCTTGGAACTGATGTAAACCCATTTTCAAGGACTTCAGAAAATAATAATACTCTGTCTGTCTCTAGCTTTAGTCAATTGGGAGCTTCTTTGAGCATGGGTAATGAAAGGCCTTCTGCGCTCCCAGTGGATACTCTGGCTCAAACTAGCTCCTTTGGAACTAGAGGAAATCCGTTGGCATCCAATGTGACAAACCAAACTGGTGGAGGCATTGCAGGTGGCCAAAGTAACCTCTTTTCCACATCAGCAGAAGTTGCAAAGTTTCCCAGTATGACTACACAGCAATCGTTTATTGTAAGCAATGGCCCTAGCTCTGGCCTAATGTTTCCAGCAAGCACAGGTGTTCAGTTGTCAAGCAAGTCCAAAGATGAGAATGTCTCTGGAGATGTCAGCATTTGGTTAAAAGAGAAATGGATTCCTGGAGAGATTCCGGAAGAAGCTCCTCCTGATGCATTTATTGGGTAG 1191 0.4282 MHNRKELCRNFQRGSCQYGERCRFLHMLSQQQKQTANPYGFGSHSSSHQKQTANPFGFGSLSSSQQQHRTNPFGFGVQNSSQPTGGVNSEFRHQFKVLPLPIIDDDLLVDQSFENKWTRPSSSPQNSSSRKTDANSQTANHKCTDPETCKRQIVEDFEQEKPLWKLTCYGHCKGAPCDIVGDISYEELRAAAYEDATHGMALQSIVEKERNLLSSKLMEFQNLLREPYKIQLNSSLASDKHQSLGTDVNPFSRTSENNNTLSVSSFSQLGASLSMGNERPSALPVDTLAQTSSFGTRGNPLASNVTNQTGGGIAGGQSNLFSTSAEVAKFPSMTTQQSFIVSNGPSSGLMFPASTGVQLSSKSKDENVSGDVSIWLKEKWIPGEIPEEAPPDAFIG 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1386 396 SUPERFAMILY CCCH zinc finger 4 30 IPR036855 GO:0046872
Prci3g1386 396 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 5 27 IPR000571 GO:0046872
Prci3g1386 396 MobiDBLite consensus disorder prediction 116 143 - -
Prci3g1386 396 SMART c3hfinal6 3 28 IPR000571 GO:0046872
Prci3g1386 396 ProSiteProfiles Zinc finger C3H1-type profile. 3 29 IPR000571 GO:0046872
Prci3g1386 396 MobiDBLite consensus disorder prediction 116 144 - -
Prci3g1386 396 Gene3D - 1 95 - -
Prci3g1386 396 PANTHER NUCLEOPORIN-LIKE PROTEIN 2 7 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1386 Prci-Chr3 22909017 22923189 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci3g1386 zf-CCCH 7.5e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1386 K14321 - gmx:100814339 416.387