Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1385 ATGCATAACAGAAAAGAGCTTTGTAGAAATTTTCAGCGAGGCAGCTGCCAATATGGAGAAAGGTGTAGATTTCTTCACATGCTATCACAACAGCAAAAACAAACTGCCAATCCTTATGGATTTGGGTCTCATTCCAGTTCACACCAAAAACAAACTGCCAATCCTTTTGGATTTGGGTCCCTCTCCAGTTCACAGCAGCAGCATAGGACCAATCCTTTTGGATTTGGTGTCCAGAACAGCTCCCAGCCAACAGGGGGTGTTAATTCAGAGTTCAGACACCAGTTCAAGTCTTTTGAAAACAAATGGACTCGGCCTTCTTCCTCGCCCCAGAATAGTTCTTCGCGAAAAACTGATGCCAATTCTCAAACAGCGAACCATAAGTGCACAGATCCTGAAACTTGCAAACGTCAAATTGTAGAAGATTTTGAGCAAGAGAAACCACTTTGGAAGCTGACATGCTATGGTCATTGTAAAGGTGCTCCTTGTGACATTGTTGGTGATATTAGCTATGAAGAATTGCGGGCAGCTGCATATGAGGATGCTACGCATGGGATGGCCTTACAATCAATTGTTGAGAAGGAGAGAAATCTACTAAGTTCCAAGTTAATGGAGTTTCAGAACCTTCTTCGTGAACCTTACAAAATACAGCTGAATTCTTCTCTTGCAAGTGATAAGCATCAATCTCTTGGAACTGATGTAAACCCATTTTCAAGGACTTCAGAAAATAATAATACTCTGTCTGTCTCTAGCTTTAGTCAATTGGGAGCTTCTTTGAGCATGGGTAATGAAAGGCCTTCTGCGCTCCCAGTGGATACTCTGGCTCAAACTAGCTCCTTTGGAACTAGAGGAAATCCGTTGGCATCCAATGTGACAAACCAAACTGGTGGAGGCATTGCAGGTGGCCAAAGTAACCTCTTTTCCACATCAGCAGAAGTTGCAAAGTTTCCCAGTATGACTACACAGCAATCGTTTATTGTAAGCAATGGCCCTAGCTCTGGCCTAATGTTTCCAGCAAGCACAGGTGTTCAGTTGTCAAGCAAGTCCAAAGATGAGAATGTCTCTGGAGATGTCAGCATTTGGTTAAAAGAGAAATGGATTCCTGGAGAGATTCCGGAAGAAGCTCCTCCTGATGCATTTATTGGGTAG 1146 0.4319 MHNRKELCRNFQRGSCQYGERCRFLHMLSQQQKQTANPYGFGSHSSSHQKQTANPFGFGSLSSSQQQHRTNPFGFGVQNSSQPTGGVNSEFRHQFKSFENKWTRPSSSPQNSSSRKTDANSQTANHKCTDPETCKRQIVEDFEQEKPLWKLTCYGHCKGAPCDIVGDISYEELRAAAYEDATHGMALQSIVEKERNLLSSKLMEFQNLLREPYKIQLNSSLASDKHQSLGTDVNPFSRTSENNNTLSVSSFSQLGASLSMGNERPSALPVDTLAQTSSFGTRGNPLASNVTNQTGGGIAGGQSNLFSTSAEVAKFPSMTTQQSFIVSNGPSSGLMFPASTGVQLSSKSKDENVSGDVSIWLKEKWIPGEIPEEAPPDAFIG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1385 381 MobiDBLite consensus disorder prediction 35 130 - -
Prci3g1385 381 PANTHER NUCLEOPORIN-LIKE PROTEIN 2 7 49 - -
Prci3g1385 381 MobiDBLite consensus disorder prediction 35 93 - -
Prci3g1385 381 MobiDBLite consensus disorder prediction 100 128 - -
Prci3g1385 381 Gene3D - 1 95 - -
Prci3g1385 381 SMART c3hfinal6 3 28 IPR000571 GO:0046872
Prci3g1385 381 ProSiteProfiles Zinc finger C3H1-type profile. 3 29 IPR000571 GO:0046872
Prci3g1385 381 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 5 27 IPR000571 GO:0046872
Prci3g1385 381 SUPERFAMILY CCCH zinc finger 4 30 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1385 Prci-Chr3 22909017 22923189 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci3g1385 zf-CCCH 7.1e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1385 K14321 - gmx:100814339 426.402