Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1358 ATGGCTGTACCAGTGAGAATCGTTCGACCGCTTGCTGTACTGTTGCTGATCTTGTGCTTCTTTTCTGGTTTACATGGGAAGTCAGATTCAGATGGTGATTCGTCTTCCACGTTGAGGTTGCTTTTGGAGGTGAAGAAGTCATTCATGGAAGACCCAGATAATGTTTTGGCTGATTGGTCTGAGAACGACACGGATTACTGTAGCTGGAGAGGGATTACTTGTGGGTTGAACTCCATGGATGGCTCGGCTATGCTAGTGGGACTTAACCTGTCTGACTCGTCACTCACTGGGTCAATCTCTCCCTCACTCGGTCTCTTACATAACCTGCTCCAACTTGATCTTTCTTCTAACCGCCTTACTGGTCCCATCCCACCTGCTCTCTCCAATCTCTCTTCTTTGGAGTATCTGCTTCTCTTCTCTAACCAACTCACTGGTCATATCCCCACTGAGTTGGGTTCGCTCGTGAGTCTCCGAGTCATTCAAATCGGTGACAACCCGTTAACGGGTACCATTCCTACGTCTTTTGGGAATTTAATTAGTCTCGTGACACTTGGTTTGGCCTCTAGTAGTCTCACTGGGTCTATTCCATCGCAACTCGGACGGCTCGATCGACTTGAGAATCTGATTGTACAAGACAATGAACTCACAGGTTCGATTCCGGCCGAGTTGGGAAACTGTTCGAACCTCACTGTTTTCACTGCTGCAAACAACGGACTCAATGGGAATCTTCCGAGTGAACTTGGTGGGCTTGAGAACCTGCATCTTCTCAACCTTGCGAACAACAGTATAACAGGGGAGATACCGAGTCAACTCGGGAATCAGCTGAGTCAGCTCGTTTATTTGAATCTCATGGGCAACCAGCTCGAGGGTCGTATTCCAACGTCTTTATCTCAGCTGAGAAATCTTCAAAATCTGGACTTGTCGTTCAACAAGCTTGTTGGTGGAATTCCTGAAGAACTGGGAAACATGGGTCAGCTTGAGTACATGGTTCTATCTGGGAATCCTCTCTCTGGGGTCATCCCCAGAGGCATATGTTCCAACTTGACGAGTTTGGAGCATTTGATGTTGTCGGACACTGCTCTCTCCGGTGAAATTCCTAGTGAGTTAAGCCAGTGTCAATCGATGAAACAGCTTGATTTGTCAAACAATTCCTTAAATGGATCAATACCCATTGAGCTTTACGAGTTGTCTGGGCTAACTGATTTGTTACTCAATAACAACAGCTTGATCGGCTCAATCTCTCCTTTCATAGGAAATCTAAGTAACATGCAGACATTTGCATTGTTCCACAACAATTTACAGGGTGCTCTCCCCAGAGGGATTGGGATGCTGGGAAAGCTGGAAACACTGTTTCTATATGATAATCAATTATCGGAGGAGATTCCTATGGAGATTGGTAATTGTTCGAGTTTGCAGATGGTTGATTTCTTCGGAAACAAGTTCACTGGGGAAATTCCCATCACTATTGGAAGGCTTAAAGAGTTGAATTTCCTTCATCTCAGACAGAACGAACTGGTGGGAGAGATTCCAGCCACTTTGGGTTACTGTCATAAGCTAACTGTCCTTGACTTGGCAGATAATTATCTCTCAGGTGGAATTCCTTCAACATTTGGATTACTGAAATATTTGGAGCAACTCATGCTGTATAACAATTCCCTTGAAGGTAATCTCCCTCACCAACTGATAAATCTGAAGAATCTGACAAGGGTCAATCTTTCAAAGAACAGACTGAATGGTAGTTTAGCTGTATTGTGTAGCTCTCGGAATTTTCTCTCTTTTGATGTCACAAACAATGCATTCGATGGTGATATTGCGCCCCAGCTGGGAAATTCAGCTTCTCTTGAGAGGCTAAGATTAGGAAAGAACAACCTTTCTGGTGAAATTCCAAGGACATTGGGGAAAATTGAAGGGCTTTCATTGTTAGACCTGTCTGAAAATTCTCTCACCGGACCAATACCAGCAGAGATTTTCTTGTGCAAGAAGCTGACTCATATTGATTTGAACAACAACATGCTATCTGGGCCAATACCATCCTGGCTTGGAAGCTTGCCTCACTTGGGCGAGCTTAAGCTATCTTTCAATCAGTTTTCTGGGAATCTTCCATCAGAGCTATTCGCGTGTTCTAAATTGTTAGTTCTCTCCCTAAACAGCAACTCTCTTAATGGAAGTATTCCTGATGATATAGGTAACCTCACATCCCTTAATATCCTCAATGTTGAGCAAAACAACTTCTCCGGACCAGTCCCTGCGGCCATAGGTAAGTTAAGCAAGCTTTATGAGCTGAGAATGTCCAGGAACAGCTTTAATGGTGAAATTCCAAGTGAGCTTGGAAGGCTGCAGAATCTCCAAAGCATTCTAGACCTCAGTTACAACAATCTCTCTGGCGAAATCCCACCTTTTCTTGGGACACTTTCAAAGTTGGAAGAGCTTGATCTTTCTCACAATCAGCTCACAGGACAAGTCCCTCTTCAAGTGGGTGAAATGAGCAGCTTGGGAAAGCTTGATCTTTCTTACAATAATCTTGAAGGTGAGTTAAATGAGCAATTCTCCCATTGGCCACCTAAGGCTTTTGAAGGCAACTTGCATCTCTGTGGAAGCCCTCTTAAACATTGCAATGCCGATGGCTTGAGCAATCACCTGTTAGGCCTGAGTAAAACATCAGTAGTGATAATCTCAGCTCTTTCAACATTAGCAGCAGTTACACTAGCAATACTTGCAGTGAGAATGTTCATGAAGAACAAGCAAGAATTTCAAGGAAAAGGCAGAGAAGTGAACCATGTTTACTCCTCCTCATCATCATCACAAGCGCAACGAAGACCACTCTTCCGGTATAATACAGCCAGGAAGCAAGACATAAGGTGGGAGGACATCATGGATGCCACTGCAAATCTAAGCGACGAGTTCATAATTGGTTCAGGAGGGTCTGGGACAATATACAGAGCAGAATTGCCATCAGGGGATACAGTAGCTGTGAAGAAGATTTCAGGGAAAGATGACTTCATGCATAACAAGAGCTTCCTGAGAGAAGTGAAGACTCTGGGGAGGATCAGGCACAGACATCTGGTGAAGCTGATGGGTTATTGCAGCAACAAGAACAAAGGAGAAGGATGGAATCTGTTGATATATGAGTTCCTGGAGAATGGGAGTGTGTGGGATTGGTTACATGGAAAACCACAAAAGACAAGAAGGAGCCTTGATTGGGAAGCAAGGTTCAAAATTGCAGTAGGACTAGCCAGAGGTGTAGAGTACCTGCATCATGACTGTGTGCCAAAGATCATTCACAGAGACATCAAGTCCAGCAATGTGTTGTTAGATTCCAAAATGGAGGCTCACTTGGGAGACTTTGGATTGGCCAAAGAACTCAACTGTGAGAACTCCAACACCGAGTCTAATTCTTGGTTTGCTGGGTCCTATGGCTACATTGCTCCAGAGTGTGCATACTCACTGAAGGCAACAGAGAAGAGTGACGTGTACAGTATGGGGATAGTGTTGATGGAACTTGTGAGTGGGAAGATGCCAACGGATGAAGCTTTTGGAGCAGAGATGGATATGGTGAGATGGGTTGAAGTGAACATTGAAATGCATTCTGAGGAATTGATTGATCCTGAGCTGAGGCCTCTGGCACCAGCACAACAGTTTGCAGCATTCCAAGTGCTTGAGATTGCATTGCACTGCACCAAAACGACGCCGCATGAGAGACCGTCTTCCCGCCAAGTCTGTGATCTTCTTCTTCATGTGTTCAGTAACAGAGTGCTTGACTTTGGCAAGATGAATTTGAATCGCCACGAGTGA 3792 0.4467 MAVPVRIVRPLAVLLLILCFFSGLHGKSDSDGDSSSTLRLLLEVKKSFMEDPDNVLADWSENDTDYCSWRGITCGLNSMDGSAMLVGLNLSDSSLTGSISPSLGLLHNLLQLDLSSNRLTGPIPPALSNLSSLEYLLLFSNQLTGHIPTELGSLVSLRVIQIGDNPLTGTIPTSFGNLISLVTLGLASSSLTGSIPSQLGRLDRLENLIVQDNELTGSIPAELGNCSNLTVFTAANNGLNGNLPSELGGLENLHLLNLANNSITGEIPSQLGNQLSQLVYLNLMGNQLEGRIPTSLSQLRNLQNLDLSFNKLVGGIPEELGNMGQLEYMVLSGNPLSGVIPRGICSNLTSLEHLMLSDTALSGEIPSELSQCQSMKQLDLSNNSLNGSIPIELYELSGLTDLLLNNNSLIGSISPFIGNLSNMQTFALFHNNLQGALPRGIGMLGKLETLFLYDNQLSEEIPMEIGNCSSLQMVDFFGNKFTGEIPITIGRLKELNFLHLRQNELVGEIPATLGYCHKLTVLDLADNYLSGGIPSTFGLLKYLEQLMLYNNSLEGNLPHQLINLKNLTRVNLSKNRLNGSLAVLCSSRNFLSFDVTNNAFDGDIAPQLGNSASLERLRLGKNNLSGEIPRTLGKIEGLSLLDLSENSLTGPIPAEIFLCKKLTHIDLNNNMLSGPIPSWLGSLPHLGELKLSFNQFSGNLPSELFACSKLLVLSLNSNSLNGSIPDDIGNLTSLNILNVEQNNFSGPVPAAIGKLSKLYELRMSRNSFNGEIPSELGRLQNLQSILDLSYNNLSGEIPPFLGTLSKLEELDLSHNQLTGQVPLQVGEMSSLGKLDLSYNNLEGELNEQFSHWPPKAFEGNLHLCGSPLKHCNADGLSNHLLGLSKTSVVIISALSTLAAVTLAILAVRMFMKNKQEFQGKGREVNHVYSSSSSSQAQRRPLFRYNTARKQDIRWEDIMDATANLSDEFIIGSGGSGTIYRAELPSGDTVAVKKISGKDDFMHNKSFLREVKTLGRIRHRHLVKLMGYCSNKNKGEGWNLLIYEFLENGSVWDWLHGKPQKTRRSLDWEARFKIAVGLARGVEYLHHDCVPKIIHRDIKSSNVLLDSKMEAHLGDFGLAKELNCENSNTESNSWFAGSYGYIAPECAYSLKATEKSDVYSMGIVLMELVSGKMPTDEAFGAEMDMVRWVEVNIEMHSEELIDPELRPLAPAQQFAAFQVLEIALHCTKTTPHERPSSRQVCDLLLHVFSNRVLDFGKMNLNRHE 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1358 1263 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 486 582 - -
Prci3g1358 1263 Gene3D Ribonuclease Inhibitor 186 294 IPR032675 -
Prci3g1358 1263 SUPERFAMILY Protein kinase-like (PK-like) 950 1243 IPR011009 -
Prci3g1358 1263 SMART LRR_typ_2 635 659 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 755 779 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 130 154 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 106 129 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 323 347 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 492 516 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 202 226 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 250 274 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 828 859 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 396 420 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 348 372 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 299 322 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 444 468 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 683 707 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 804 826 IPR003591 -
Prci3g1358 1263 SMART LRR_typ_2 564 587 IPR003591 -
Prci3g1358 1263 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 924 1044 - -
Prci3g1358 1263 Pfam Leucine rich repeat N-terminal domain 40 74 IPR013210 -
Prci3g1358 1263 SUPERFAMILY L domain-like 275 602 - -
Prci3g1358 1263 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 489 1243 - -
Prci3g1358 1263 ProSiteProfiles Protein kinase domain profile. 964 1248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1358 1263 SUPERFAMILY L domain-like 62 342 - -
Prci3g1358 1263 Gene3D Ribonuclease Inhibitor 295 376 IPR032675 -
Prci3g1358 1263 Gene3D Ribonuclease Inhibitor 539 875 IPR032675 -
Prci3g1358 1263 Gene3D Ribonuclease Inhibitor 377 538 IPR032675 -
Prci3g1358 1263 Gene3D Transferase(Phosphotransferase) domain 1 1045 1246 - -
Prci3g1358 1263 Gene3D Ribonuclease Inhibitor 38 185 IPR032675 -
Prci3g1358 1263 FunFam Leucine-rich repeat receptor-like protein kinase 1045 1259 - -
Prci3g1358 1263 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1092 1104 IPR008271 GO:0004672|GO:0006468
Prci3g1358 1263 SMART serkin_6 964 1248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1358 1263 SMART LRR_sd22_2 106 132 - -
Prci3g1358 1263 SMART LRR_sd22_2 540 566 - -
Prci3g1358 1263 SMART LRR_sd22_2 804 825 - -
Prci3g1358 1263 SMART LRR_sd22_2 299 318 - -
Prci3g1358 1263 SMART LRR_sd22_2 444 463 - -
Prci3g1358 1263 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 34 198 - -
Prci3g1358 1263 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 292 391 - -
Prci3g1358 1263 Gene3D Phosphorylase Kinase; domain 1 924 1044 - -
Prci3g1358 1263 FunFam Uncharacterized protein 392 485 - -
Prci3g1358 1263 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 583 875 - -
Prci3g1358 1263 Pfam Protein kinase domain 969 1240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1358 1263 ProSitePatterns Protein kinases ATP-binding region signature. 970 993 IPR017441 GO:0005524
Prci3g1358 1263 Pfam Leucine rich repeat 277 336 IPR001611 GO:0005515
Prci3g1358 1263 Pfam Leucine rich repeat 518 577 IPR001611 GO:0005515
Prci3g1358 1263 SUPERFAMILY L domain-like 622 868 - -
Prci3g1358 1263 PRINTS Leucine-rich repeat signature 804 817 - -
Prci3g1358 1263 PRINTS Leucine-rich repeat signature 375 388 - -
Prci3g1358 1263 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 204 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1358 Prci-Chr3 22173910 22178724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1358 41 708 Receptor kinase-like Gene Family AT1G17750 36.944 5.48e-101 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci3g1358 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1358 - - gmx:100801889 1801.56