Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1310 ATGAGCTGCCAGTCAAATGTTAAGAGTGTTGATATTCCTGTATGTTTTACGACAAGGAATATTTCGTTCCAGGTTCAGAGTCATCCTCCTGGCTATATGCAGCCTGCTTTTGTTAGTGGATGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATATTCAGGAGCAATTATATGAAGGATTAACTACTGGATTCTTGCCAGTTGAGCTTCCTGTGTATCCTGTGGTTAATGGCACATTAATGAATCCTGTACCATTGAATTACTTCAAGCAGTTTCCTGACCATGTTTCCACAGGGTTCATATACCTGAGCATGAGTAGCTCAATCATAACCATGCCTACAGGTTGCTCCACATCTTCTGGTAAGGATATAACATCATTCAGACAAGGGTCCTCTGAGCATGCTCCTCCTGTAGCTGTCAACTTTGATTCACGGTCTGTTTCCCAGTCACATGTCAACTACACCAGTAAGGAATTCTTGACATTGAACTCAAAGTTATATGAAGAATGCTGTTGGCTTTATGATGATGAAAAGGGAAAGAAGCATGGACCACGTTCCATTTTGGAATTAATTTCCTTGCATCATTATGGACATCTCCAAGATTCATCAGTGATTCATCATAATGAAAATAAGTGTAGCCCCTTTGTCCTTTTGCCTGCTATAAATGCATGGAAAACAGGAAAGTTTGAAAACATCTGTAGATCAGATTCCAAAAGTGAAATGGCTTATAGTGATACCAGAGGCTTCATCTATGAAATATCTGAGGACATTTCTTCTCAACTGCATTCGGGAGTCATGAGAACTGCCCGCAGAGTAGTGTTGGATGAGATTATTAGTAGCACCATTGCAGAATTCGTTAGTGAAAAGAAATCTCGGAGACACAAGCGGGAATTAGTTGATCAGCTTTCTGAGACTAGCTTGTTAGGCTGCAGAATGACTGAGGCTTCTGTGGAGATCAGAGAACGTACTGATCTTACAAGTGAGCCAGCATCTTCCCAACTGCTTGACGATCAGTCTTCTTGTGAAGTTTCCAGAATGTCTCCAACAAGCACTAAATCGGTTGGAAGCATTGAAAACTTTTGGTGGTCATATTCAGTTGTTCGTAAAGTGCTTTGTGATTATTGCATGCAAGTCATGTGGAATGCTGTAGTTTATGACTCCATGGCAGAGTACATACATAACTGGAGAAAGAGAAAACTTTGGTCTATTTGTCATAAGCCTCAACCATCAATTAATGGATGTAAAGATTATGGTGGAATGATCAAATCAGGAGAAGCTTTGCTTCCCAGGCTGGGTTCCTCTCAACATGATGGTGTTCAGCATCCTCATTCTGGAGTGGAGGCAATTGAAAGAGACTATCTTAGTCAATCGTTGTCTTTGTCTTCTGTTCTCTTGAAAGATGGTAACATTTCAGAAAATGGAAGAGTGTCATGCTCTGACCGTGATCATATAGATTTGATATGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTCATCATTGGAGGCATCTTTAACTGAATACATTAAAAGTTTTGTTGACAAGGAAGTGAAAAGATTATTTATTTGTCCTGAAGAGGACAACTTGGGCGAGGATGCTCTCAGTGATGGCATTTTTCCAGAGATATCTTGTGACAAAACATCTGAAGAGGGGATTTTATCTGACAATAAGGTTACTACGAATGAAGGAGATTGTCTTCAAGATTCTATATCTGGAAACCATTTGTCTACTTTATTCTCAAATGCATTTCAGGAGTTGCATGCAAATGTAGATGATGTGGTAAATGAAAAGGAGATTGGTGACATATCACCTCCAGGATGTGAAAAGAGTTCAAAAACAATAGTCCCACAATACAATCATAAGTATCGACCTTCAAGATTAGTTGAAAGTGTTCCTGAGATAACAAAATATGTTGCGACAGCCCTATGCCGACAGAAGTTGCATTCTGAGGTTCTTGAAGAGTGGAAATCTTTGTTTCTTGATGCTGTAGCCAATCAACTTGTCGCATCATTCTGCACTACTAAGAAAGTCAGCCAGCGTAATGGTCACATGGAAGGGAAAGTACTGAATTTGTTTGAGGAATATTTGAACAATCCAACTCTGGGAAGAATGAAGAAAATACCCAAATCTTCTTCATCAGAAGATTCTCAGATGGTTGGGAAATATACATATCATCGCAAGAAGCTGCCACAGAAAGAGCTAGGTTCTTCTTCACACATAGCTGTGCCTGTCAAAAAACAAGTGGATAAGCAGAAGAAACGTTTTTCTGGGGATTTGAATGAGTCTGCTAAAGTTGGAATATCTCCTGATAAAACTGCACAGACTAAGCTGGTAAAAGGGAAGAAGGATAAGCAGGCTGTTGGTGCTGAAAGAAACTTGCAGAGTAAGAAGTCATCCGTAAATAATGCAACTAGTAAAAAATTATTGAAGCATTCACAGGCAGTTCAAGATGATGTCAGCGGTGGTGAGAAAAGTAATGGGGAAAAGATTTTAGCTGTTGTTGAAAATAGTGTTGGCAAGAAAAAGGTAGTTGATAACAGCAATGGTCGTGATAGTGCTATTCATGGAAAGTTCGCTCGTCACTGCTCCAAGGAAACTCTTAATGCAACCAATAAAGTATCAAAACCAAAAAGGAAGTATCTAGTGAATGATGTGCCATCCTCACGTCCTTCAAAGGCTTTGAAAATTGCTTATGATGGTTCAAAGGCTGGAGTTGGTGGACACACCATGTCAAAGACGAAGTCTGCCAGATCCAAGTCATTGAATTTATGTCCTAGATCTCATGGATGTGCTAGGACTTCTATTAATGGGTGGGAATGGCATAACTGGTCTGTAAATGCCAGTTCTACTGATAGAGCATGTGTTAGGGGAACACTGTTTGTTCAAAAGAACTGTATACCATCTGATAGTAACCCAACTCATTGGTCAAATTGTAAGGGTCTTTCTGCACGAACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAATTGAAGGCAAGGAAAAAGCGTTTATGTTTTCAAAGAAGTAAAATACATGACTGGGGTATTATTGCCTTGGAGTCAATTGAGGCAGAGGACTTCGTGATTGAATATATTGGAGAACTAATCCGTCCTCGGATATCTGATATACGTGAGCGTCAGTATGAAAAGATGGGAATTGGCAGCAGTTATCTGTTTAGACTTGATGATGGTTATGTGGTTGATGCTACGAAAAGAGGTGGGATTGCAAGATTTATAAACCACTCTTGTGAGCCTAATTGCTATACCAAGGTCATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGTCATATAGCTGCTGGTGAAGAAATTACATACAACTACAAATTTCCTTTGGAGGAGAATAAGATTCCATGCAACTGTGGCTCCAAAAAGTGTCGTGGATCACTGAATTAG 3465 0.3977 MSCQSNVKSVDIPVCFTTRNISFQVQSHPPGYMQPAFVSGWMYVNENGQMCGPYIQEQLYEGLTTGFLPVELPVYPVVNGTLMNPVPLNYFKQFPDHVSTGFIYLSMSSSIITMPTGCSTSSGKDITSFRQGSSEHAPPVAVNFDSRSVSQSHVNYTSKEFLTLNSKLYEECCWLYDDEKGKKHGPRSILELISLHHYGHLQDSSVIHHNENKCSPFVLLPAINAWKTGKFENICRSDSKSEMAYSDTRGFIYEISEDISSQLHSGVMRTARRVVLDEIISSTIAEFVSEKKSRRHKRELVDQLSETSLLGCRMTEASVEIRERTDLTSEPASSQLLDDQSSCEVSRMSPTSTKSVGSIENFWWSYSVVRKVLCDYCMQVMWNAVVYDSMAEYIHNWRKRKLWSICHKPQPSINGCKDYGGMIKSGEALLPRLGSSQHDGVQHPHSGVEAIERDYLSQSLSLSSVLLKDGNISENGRVSCSDRDHIDLICILESVENELHSSLEASLTEYIKSFVDKEVKRLFICPEEDNLGEDALSDGIFPEISCDKTSEEGILSDNKVTTNEGDCLQDSISGNHLSTLFSNAFQELHANVDDVVNEKEIGDISPPGCEKSSKTIVPQYNHKYRPSRLVESVPEITKYVATALCRQKLHSEVLEEWKSLFLDAVANQLVASFCTTKKVSQRNGHMEGKVLNLFEEYLNNPTLGRMKKIPKSSSSEDSQMVGKYTYHRKKLPQKELGSSSHIAVPVKKQVDKQKKRFSGDLNESAKVGISPDKTAQTKLVKGKKDKQAVGAERNLQSKKSSVNNATSKKLLKHSQAVQDDVSGGEKSNGEKILAVVENSVGKKKVVDNSNGRDSAIHGKFARHCSKETLNATNKVSKPKRKYLVNDVPSSRPSKALKIAYDGSKAGVGGHTMSKTKSARSKSLNLCPRSHGCARTSINGWEWHNWSVNASSTDRACVRGTLFVQKNCIPSDSNPTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKRLCFQRSKIHDWGIIALESIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKKCRGSLN 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1310 1154 Gene3D SET domain 911 1154 IPR046341 -
Prci3g1310 1154 MobiDBLite consensus disorder prediction 793 812 - -
Prci3g1310 1154 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 891 1154 IPR044570 GO:0042800|GO:0051568
Prci3g1310 1154 ProSiteProfiles SET domain profile. 1015 1132 IPR001214 GO:0005515
Prci3g1310 1154 Gene3D - 160 249 IPR035445 -
Prci3g1310 1154 MobiDBLite consensus disorder prediction 777 792 - -
Prci3g1310 1154 Pfam SET domain 1027 1131 IPR001214 GO:0005515
Prci3g1310 1154 CDD SET_SETD1 1003 1150 IPR037841 GO:0042800|GO:0048188
Prci3g1310 1154 SMART set_7 1015 1138 IPR001214 GO:0005515
Prci3g1310 1154 MobiDBLite consensus disorder prediction 747 761 - -
Prci3g1310 1154 SUPERFAMILY GYF domain 168 222 IPR035445 -
Prci3g1310 1154 SUPERFAMILY SET domain 1010 1151 IPR046341 -
Prci3g1310 1154 ProSiteProfiles Post-SET domain profile. 1138 1154 IPR003616 -
Prci3g1310 1154 SMART PostSET_3 1138 1154 IPR003616 -
Prci3g1310 1154 MobiDBLite consensus disorder prediction 732 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1310 Prci-Chr3 19889736 19916582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1310 1021 1154 C2H2 Transcription Factor Family AT2G23740 38.462 3.73e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci3g1310 SET 2.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1310 - - gmx:100805708 1225.31