Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1309 ATGGTCTTCTCTGCAGCCTTTATGCATGAAGAAGGCCCCTTTTCTTTCTCCAAGAAGAGGCTGAGAGTGTTGGAATTTGGATATCAAGACCTACATCCACATGCATTTGCAGGACGTTTCAGTGATGTGCCATTGCCTTCACATCTGGAAGTAGAAAGGGATACTGGTGATATTCCCTCTTATTCCAATCTTGATGATAGGGCTGATTCAGATTCTGGATTGGATATGAGCTGCCAGTCAAATGTTAAGAGTGTTGATATTCCTGTATGTTTTACGACAAGGAATATTTCGTTCCAGGTTCAGAGTCATCCTCCTGGCTATATGCAGCCTGCTTTTGTTAGTGGATGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATATTCAGGAGCAATTATATGAAGGATTAACTACTGGATTCTTGCCAGTTGAGCTTCCTGTGTATCCTGTGGTTAATGGCACATTAATGAATCCTGTACCATTGAATTACTTCAAGCAGTTTCCTGACCATGTTTCCACAGGGTTCATATACCTGAGCATGAGTAGCTCAATCATAACCATGCCTACAGGTTGCTCCACATCTTCTGGTAAGGATATAACATCATTCAGACAAGGGTCCTCTGAGCATGCTCCTCCTGTAGCTGTCAACTTTGATTCACGGTCTGTTTCCCAGTCACATGTCAACTACACCAGTAAGGAATTCTTGACATTGAACTCAAAGTTATATGAAGAATGCTGTTGGCTTTATGATGATGAAAAGGGAAAGAAGCATGGACCACGTTCCATTTTGGAATTAATTTCCTTGCATCATTATGGACATCTCCAAGATTCATCAGTGATTCATCATAATGAAAATAAGTGTAGCCCCTTTGTCCTTTTGCCTGCTATAAATGCATGGAAAACAGGAAAGTTTGAAAACATCTGTAGATCAGATTCCAAAAGTGAAATGGCTTATAGTGATACCAGAGGCTTCATCTATGAAATATCTGAGGACATTTCTTCTCAACTGCATTCGGGAGTCATGAGAACTGCCCGCAGAGTAGTGTTGGATGAGATTATTAGTAGCACCATTGCAGAATTCGTTAGTGAAAAGAAATCTCGGAGACACAAGCGGGAATTAGTTGATCAGCTTTCTGAGACTAGCTTGTTAGGCTGCAGAATGACTGAGGCTTCTGTGGAGATCAGAGAACGTACTGATCTTACAAGTGAGCCAGCATCTTCCCAACTGCTTGACGATCAGTCTTCTTGTGAAGTTTCCAGAATGTCTCCAACAAGCACTAAATCGGTTGGAAGCATTGAAAACTTTTGGTGGTCATATTCAGTTGTTCGTAAAGTGCTTTGTGATTATTGCATGCAAGTCATGTGGAATGCTGTAGTTTATGACTCCATGGCAGAGTACATACATAACTGGAGAAAGAGAAAACTTTGGTCTATTTGTCATAAGCCTCAACCATCAATTAATGGATGTAAAGATTATGGTGGAATGATCAAATCAGGAGAAGCTTTGCTTCCCAGGCTGGGTTCCTCTCAACATGATGGTGTTCAGCATCCTCATTCTGGAGTGGAGGCAATTGAAAGAGACTATCTTAGTCAATCGTTGTCTTTGTCTTCTGTTCTCTTGAAAGATGGTAACATTTCAGAAAATGGAAGAGTGTCATGCTCTGACCGTGATCATATAGATTTGATATGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTCATCATTGGAGGCATCTTTAACTGAATACATTAAAAGTTTTGTTGACAAGGAAGTGAAAAGATTATTTATTTGTCCTGAAGAGGACAACTTGGGCGAGGATGCTCTCAGTGATGGCATTTTTCCAGAGATATCTTGTGACAAAACATCTGAAGAGGGGATTTTATCTGACAATAAGGTTACTACGAATGAAGGAGATTGTCTTCAAGATTCTATATCTGGAAACCATTTGTCTACTTTATTCTCAAATGCATTTCAGGAGTTGCATGCAAATGTAGATGATGTGGTAAATGAAAAGGAGATTGGTGACATATCACCTCCAGGATGTGAAAAGAGTTCAAAAACAATAGTCCCACAATACAATCATAAGTATCGACCTTCAAGATTAGTTGAAAGTGTTCCTGAGATAACAAAATATGTTGCGACAGCCCTATGCCGACAGAAGTTGCATTCTGAGGTTCTTGAAGAGTGGAAATCTTTGTTTCTTGATGCTGTAGCCAATCAACTTGTCGCATCATTCTGCACTACTAAGAAAGTCAGCCAGCGTAATGGTCACATGGAAGGGAAAGTACTGAATTTGTTTGAGGAATATTTGAACAATCCAACTCTGGGAAGAATGAAGAAAATACCCAAATCTTCTTCATCAGAAGATTCTCAGATGGTTGGGAAATATACATATCATCGCAAGAAGCTGCCACAGAAAGAGCTAGGTTCTTCTTCACACATAGCTGTGCCTGTCAAAAAACAAGTGGATAAGCAGAAGAAACGTTTTTCTGGGGATTTGAATGAGTCTGCTAAAGTTGGAATATCTCCTGATAAAACTGCACAGACTAAGCTGGTAAAAGGGAAGAAGGATAAGCAGGCTGTTGGTGCTGAAAGAAACTTGCAGAGTAAGAAGTCATCCGTAAATAATGCAACTAGTAAAAAATTATTGAAGCATTCACAGGCAGTTCAAGATGATGTCAGCGGTGGTGAGAAAAGTAATGGGGAAAAGATTTTAGCTGTTGTTGAAAATAGTGTTGGCAAGAAAAAGGTAGTTGATAACAGCAATGGTCGTGATAGTGCTATTCATGGAAAGTTCGCTCGTCACTGCTCCAAGGAAACTCTTAATGCAACCAATAAAGTATCAAAACCAAAAAGGAAGTATCTAGTGAATGATGTGCCATCCTCACGTCCTTCAAAGGCTTTGAAAATTGCTTATGATGGTTCAAAGGCTGGAGTTGGTGGACACACCATGTCAAAGACGAAGTCTGCCAGATCCAAGTCATTGAATTTATGTCCTAGATCTCATGGATGTGCTAGGACTTCTATTAATGGGTGGGAATGGCATAACTGGTCTGTAAATGCCAGTTCTACTGATAGAGCATGTGTTAGGGGAACACTGTTTGTTCAAAAGAACTGTATACCATCTGATAGTAACCCAACTCATTGGTCAAATTGTAAGGGTCTTTCTGCACGAACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAATTGAAGGCAAGGAAAAAGCGTTTATGTTTTCAAAGAAGTAAAATACATGACTGGGGTATTATTGCCTTGGAGTCAATTGAGGCAGAGGACTTCGTGATTGAATATATTGGAGAACTAATCCGTCCTCGGATATCTGATATACGTGAGCGTCAGTATGAAAAGATGGGAATTGGCAGCAGTTATCTGTTTAGACTTGATGATGGTTATGTGGTTGATGCTACGAAAAGAGGTGGGATTGCAAGATTTATAAACCACTCTTGTGAGCCTAATTGCTATACCAAGGTCATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGTCATATAGCTGCTGGTGAAGAAATTACATACAACTACAAATTTCCTTTGGAGGAGAATAAGATTCCATGCAACTGTGGCTCCAAAAAGTAA 3672 0.3995 MVFSAAFMHEEGPFSFSKKRLRVLEFGYQDLHPHAFAGRFSDVPLPSHLEVERDTGDIPSYSNLDDRADSDSGLDMSCQSNVKSVDIPVCFTTRNISFQVQSHPPGYMQPAFVSGWMYVNENGQMCGPYIQEQLYEGLTTGFLPVELPVYPVVNGTLMNPVPLNYFKQFPDHVSTGFIYLSMSSSIITMPTGCSTSSGKDITSFRQGSSEHAPPVAVNFDSRSVSQSHVNYTSKEFLTLNSKLYEECCWLYDDEKGKKHGPRSILELISLHHYGHLQDSSVIHHNENKCSPFVLLPAINAWKTGKFENICRSDSKSEMAYSDTRGFIYEISEDISSQLHSGVMRTARRVVLDEIISSTIAEFVSEKKSRRHKRELVDQLSETSLLGCRMTEASVEIRERTDLTSEPASSQLLDDQSSCEVSRMSPTSTKSVGSIENFWWSYSVVRKVLCDYCMQVMWNAVVYDSMAEYIHNWRKRKLWSICHKPQPSINGCKDYGGMIKSGEALLPRLGSSQHDGVQHPHSGVEAIERDYLSQSLSLSSVLLKDGNISENGRVSCSDRDHIDLICILESVENELHSSLEASLTEYIKSFVDKEVKRLFICPEEDNLGEDALSDGIFPEISCDKTSEEGILSDNKVTTNEGDCLQDSISGNHLSTLFSNAFQELHANVDDVVNEKEIGDISPPGCEKSSKTIVPQYNHKYRPSRLVESVPEITKYVATALCRQKLHSEVLEEWKSLFLDAVANQLVASFCTTKKVSQRNGHMEGKVLNLFEEYLNNPTLGRMKKIPKSSSSEDSQMVGKYTYHRKKLPQKELGSSSHIAVPVKKQVDKQKKRFSGDLNESAKVGISPDKTAQTKLVKGKKDKQAVGAERNLQSKKSSVNNATSKKLLKHSQAVQDDVSGGEKSNGEKILAVVENSVGKKKVVDNSNGRDSAIHGKFARHCSKETLNATNKVSKPKRKYLVNDVPSSRPSKALKIAYDGSKAGVGGHTMSKTKSARSKSLNLCPRSHGCARTSINGWEWHNWSVNASSTDRACVRGTLFVQKNCIPSDSNPTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKRLCFQRSKIHDWGIIALESIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKK 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1309 1223 CDD SET_SETD1 1078 1223 IPR037841 GO:0042800|GO:0048188
Prci3g1309 1223 MobiDBLite consensus disorder prediction 52 75 - -
Prci3g1309 1223 Gene3D - 235 324 IPR035445 -
Prci3g1309 1223 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 966 1223 IPR044570 GO:0042800|GO:0051568
Prci3g1309 1223 MobiDBLite consensus disorder prediction 852 867 - -
Prci3g1309 1223 ProSiteProfiles SET domain profile. 1090 1207 IPR001214 GO:0005515
Prci3g1309 1223 MobiDBLite consensus disorder prediction 822 836 - -
Prci3g1309 1223 SUPERFAMILY GYF domain 243 297 IPR035445 -
Prci3g1309 1223 MobiDBLite consensus disorder prediction 868 887 - -
Prci3g1309 1223 Gene3D SET domain 986 1223 IPR046341 -
Prci3g1309 1223 MobiDBLite consensus disorder prediction 807 902 - -
Prci3g1309 1223 SMART set_7 1090 1213 IPR001214 GO:0005515
Prci3g1309 1223 SUPERFAMILY SET domain 1085 1222 IPR046341 -
Prci3g1309 1223 Pfam SET domain 1102 1206 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1309 Prci-Chr3 19889736 19919528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1309 1096 1219 C2H2 Transcription Factor Family AT2G23740 38.356 1.11e-16 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci3g1309 SET 2.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1309 - - gmx:100805708 1286.94