Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1304 ATGGTCTTCTCTGCAGCCTTTATGCATGAAGAAGGCCCCTTTTCTTTCTCCAAGAAGAGGCTGAGAGTGTTGGAATTTGGATATCAAGACCTACATCCACATGCATTTGCAGGACGTTTCAGTGATGTGCCATTGCCTTCACATCTGGAAGTAGAAAGGGCTGATTCAGATTCTGGATTGGATATGAGCTGCCAGTCAAATGTTAAGAGTGTTGATATTCCTGTATGTTTTACGACAAGGAATATTTCGTTCCAGGTTCAGAGTCATCCTCCTGGCTATATGCAGCCTGCTTTTGTTAGTGGATGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATATTCAGGAGCAATTATATGAAGGATTAACTACTGGATTCTTGCCAGTTGAGCTTCCTGTGTATCCTGTGGTTAATGGCACATTAATGAATCCTGTACCATTGAATTACTTCAAGCAGTTTCCTGACCATGTTTCCACAGGGTTCATATACCTGAGCATGAGTAGCTCAATCATAACCATGCCTACAGGTTGCTCCACATCTTCTGGTAAGGATATAACATCATTCAGACAAGGGTCCTCTGAGCATGCTCCTCCTGTAGCTGTCAACTTTGATTCACGGTCTGTTTCCCAGTCACATGTCAACTACACCAGTAAGGAATTCTTGACATTGAACTCAAAGTTATATGAAGAATGCTGTTGGCTTTATGATGATGAAAAGGGAAAGAAGCATGGACCACGTTCCATTTTGGAATTAATTTCCTTGCATCATTATGGACATCTCCAAGATTCATCAGTGATTCATCATAATGAAAATAAGTGTAGCCCCTTTGTCCTTTTGCCTGCTATAAATGCATGGAAAACAGGAAAGTTTGAAAACATCTGTAGATCAGATTCCAAAAGTGAAATGGCTTATAGTGATACCAGAGGCTTCATCTATGAAATATCTGAGGACATTTCTTCTCAACTGCATTCGGGAGTCATGAGAACTGCCCGCAGAGTAGTGTTGGATGAGATTATTAGTAGCACCATTGCAGAATTCGTTAGTGAAAAGAAATCTCGGAGACACAAGCGGGAATTAGTTGATCAGCTTTCTGAGACTAGCTTGTTAGGCTGCAGAATGACTGAGGCTTCTGTGGAGATCAGAGAACGTACTGATCTTACAAGTGAGCCAGCATCTTCCCAACTGCTTGACGATCAGTCTTCTTGTGAAGTTTCCAGAATGTCTCCAACAAGCACTAAATCGGTTGGAAGCATTGAAAACTTTTGGTGGTCATATTCAGTTGTTCGTAAAGTGCTTTGTGATTATTGCATGCAAGTCATGTGGAATGCTGTAGTTTATGACTCCATGGCAGAGTACATACATAACTGGAGAAAGAGAAAACTTTGGTCTATTTGTCATAAGCCTCAACCATCAATTAATGGATGTAAAGATTATGGTGGAATGATCAAATCAGGAGAAGCTTTGCTTCCCAGGCTGGGTTCCTCTCAACATGATGGTGTTCAGCATCCTCATTCTGGAGTGGAGGCAATTGAAAGAGACTATCTTAGTCAATCGTTGTCTTTGTCTTCTGTTCTCTTGAAAGATGGTAACATTTCAGAAAATGGAAGAGTGTCATGCTCTGACCGTGATCATATAGATTTGATATGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTCATCATTGGAGGCATCTTTAACTGAATACATTAAAAGTTTTGTTGACAAGGAAGTGAAAAGATTATTTATTTGTCCTGAAGAGGACAACTTGGGCGAGGATGCTCTCAGTGATGGCATTTTTCCAGAGATATCTTGTGACAAAACATCTGAAGAGGGGATTTTATCTGACAATAAGGTTACTACGAATGAAGGAGATTGTCTTCAAGATTCTATATCTGGAAACCATTTGTCTACTTTATTCTCAAATGCATTTCAGGAGTTGCATGCAAATGTAGATGATGTGGTAAATGAAAAGGAGATTGGTGACATATCACCTCCAGGATGTGAAAAGAGTTCAAAAACAATAGTCCCACAATACAATCATAAGTATCGACCTTCAAGATTAGTTGAAAGTGTTCCTGAGATAACAAAATATGTTGCGACAGCCCTATGCCGACAGAAGTTGCATTCTGAGGTTCTTGAAGAGTGGAAATCTTTGTTTCTTGATGCTGTAGCCAATCAACTTGTCGCATCATTCTGCACTACTAAGAAAGTCAGCCAGCGTAATGGTCACATGGAAGGGAAAGTACTGAATTTGTTTGAGGAATATTTGAACAATCCAACTCTGGGAAGAATGAAGAAAATACCCAAATCTTCTTCATCAGAAGATTCTCAGATGGTTGGGAAATATACATATCATCGCAAGAAGCTGCCACAGAAAGAGCTAGGTTCTTCTTCACACATAGCTGTGCCTGTCAAAAAACAAGTGGATAAGCAGAAGAAACGTTTTTCTGGGGATTTGAATGAGTCTGCTAAAGTTGGAATATCTCCTGATAAAACTGCACAGACTAAGCTGGTAAAAGGGAAGAAGGATAAGCAGGCTGTTGGTGCTGAAAGAAACTTGCAGAGTAAGAAGTCATCCGTAAATAATGCAACTAGTAAAAAATTATTGAAGCATTCACAGGCAGTTCAAGATGATGTCAGCGGTGGTGAGAAAAGTAATGGGGAAAAGATTTTAGCTGTTGTTGAAAATAGTGTTGGCAAGAAAAAGGTAGTTGATAACAGCAATGGTCGTGATAGTGCTATTCATGGAAAGTTCGCTCGTCACTGCTCCAAGGAAACTCTTAATGCAACCAATAAAGTATCAAAACCAAAAAGGAAGTATCTAGTGAATGATGTGCCATCCTCACGTCCTTCAAAGGCTTTGAAAATTGCTTATGATGGTTCAAAGGCTGGAGTTGGTGGACACACCATGTCAAAGACGAAGTCTGCCAGATCCAAGTCATTGAATTTATGTCCTAGATCTCATGGATGTGCTAGGACTTCTATTAATGGGTGGGAATGGCATAACTGGTCTGTAAATGCCAGTTCTACTGATAGAGCATGTGTTAGGGGAACACTGTTTGTTCAAAAGAACTGTATACCATCTGATAGTAACCCAACTCATTGGTCAAATTGTAAGGGTCTTTCTGCACGAACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAATTGAAGGCAAGGAAAAAGCGTTTATGTTTTCAAAGAAGTAAAATACATGACTGGGGTATTATTGCCTTGGAGTCAATTGAGGCAGAGGACTTCGTGATTGAATATATTGGAGAACTAATCCGTCCTCGGATATCTGATATACGTGAGCGTCAGTATGAAAAGATGGGAATTGGCAGCAGTTATCTGTTTAGACTTGATGATGGTTATGTGGTTGATGCTACGAAAAGAGGTGGGATTGCAAGATTTATAAACCACTCTTGTGAGCCTAATTGCTATACCAAGGTCATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGTCATATAGCTGCTGGTGAAGAAATTACATACAACTACAAATTTCCTTTGGAGGAGAATAAGATTCCATGCAACTGTGGCTCCAAAAAGTGTCGTGGATCACTGAATTAG 3648 0.4002 MVFSAAFMHEEGPFSFSKKRLRVLEFGYQDLHPHAFAGRFSDVPLPSHLEVERADSDSGLDMSCQSNVKSVDIPVCFTTRNISFQVQSHPPGYMQPAFVSGWMYVNENGQMCGPYIQEQLYEGLTTGFLPVELPVYPVVNGTLMNPVPLNYFKQFPDHVSTGFIYLSMSSSIITMPTGCSTSSGKDITSFRQGSSEHAPPVAVNFDSRSVSQSHVNYTSKEFLTLNSKLYEECCWLYDDEKGKKHGPRSILELISLHHYGHLQDSSVIHHNENKCSPFVLLPAINAWKTGKFENICRSDSKSEMAYSDTRGFIYEISEDISSQLHSGVMRTARRVVLDEIISSTIAEFVSEKKSRRHKRELVDQLSETSLLGCRMTEASVEIRERTDLTSEPASSQLLDDQSSCEVSRMSPTSTKSVGSIENFWWSYSVVRKVLCDYCMQVMWNAVVYDSMAEYIHNWRKRKLWSICHKPQPSINGCKDYGGMIKSGEALLPRLGSSQHDGVQHPHSGVEAIERDYLSQSLSLSSVLLKDGNISENGRVSCSDRDHIDLICILESVENELHSSLEASLTEYIKSFVDKEVKRLFICPEEDNLGEDALSDGIFPEISCDKTSEEGILSDNKVTTNEGDCLQDSISGNHLSTLFSNAFQELHANVDDVVNEKEIGDISPPGCEKSSKTIVPQYNHKYRPSRLVESVPEITKYVATALCRQKLHSEVLEEWKSLFLDAVANQLVASFCTTKKVSQRNGHMEGKVLNLFEEYLNNPTLGRMKKIPKSSSSEDSQMVGKYTYHRKKLPQKELGSSSHIAVPVKKQVDKQKKRFSGDLNESAKVGISPDKTAQTKLVKGKKDKQAVGAERNLQSKKSSVNNATSKKLLKHSQAVQDDVSGGEKSNGEKILAVVENSVGKKKVVDNSNGRDSAIHGKFARHCSKETLNATNKVSKPKRKYLVNDVPSSRPSKALKIAYDGSKAGVGGHTMSKTKSARSKSLNLCPRSHGCARTSINGWEWHNWSVNASSTDRACVRGTLFVQKNCIPSDSNPTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKRLCFQRSKIHDWGIIALESIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKKCRGSLN 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1304 1215 Gene3D - 221 310 IPR035445 -
Prci3g1304 1215 MobiDBLite consensus disorder prediction 854 873 - -
Prci3g1304 1215 MobiDBLite consensus disorder prediction 793 888 - -
Prci3g1304 1215 SUPERFAMILY GYF domain 229 283 IPR035445 -
Prci3g1304 1215 ProSiteProfiles Post-SET domain profile. 1199 1215 IPR003616 -
Prci3g1304 1215 Pfam SET domain 1088 1192 IPR001214 GO:0005515
Prci3g1304 1215 Gene3D SET domain 972 1215 IPR046341 -
Prci3g1304 1215 SMART PostSET_3 1199 1215 IPR003616 -
Prci3g1304 1215 SMART set_7 1076 1199 IPR001214 GO:0005515
Prci3g1304 1215 ProSiteProfiles SET domain profile. 1076 1193 IPR001214 GO:0005515
Prci3g1304 1215 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 952 1215 IPR044570 GO:0042800|GO:0051568
Prci3g1304 1215 CDD SET_SETD1 1064 1211 IPR037841 GO:0042800|GO:0048188
Prci3g1304 1215 MobiDBLite consensus disorder prediction 838 853 - -
Prci3g1304 1215 SUPERFAMILY SET domain 1071 1212 IPR046341 -
Prci3g1304 1215 MobiDBLite consensus disorder prediction 808 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1304 Prci-Chr3 19889736 19919528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1304 1082 1215 C2H2 Transcription Factor Family AT2G23740 38.462 3.87e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci3g1304 SET 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1304 - - gmx:100805708 1275