Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1301 ATGATGAATGATAGGAGTGGCAAGCCTGCATGGCTAGAGAGGCTCATGGCGGAGACATTCTTTGGTGGGTGTGGGGTCCACCAGAATCACAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTCCCTCAGCATCTGCCCCCACTGCCTCCCCTCACACCCCTCTCACCCGCTTCTCCAGGTGAGAAGGTATGTGTACCACGACGTCGTTCGACTGGGTGATCTGGAAAAGCTCATTGATTGTTCCAATATTCAGGCATATACGATAAACGGAGCGAAGGTGATATTCTTAAAGCAGAGGCCACAGTCACGGCCATGCAAAGGCTCCTCCAACGCCTGCTGCACTTGCGACCGCATTCTTCAGGATCCCTTCCTTTTCTGTTCTCTCTCTTGCAAGGTGGATCACATGTTGGAGGAAGGCGAGGACCTGTCTGGCATTTTGCATCAATTCCAGGAATCCGACTTCACCTACTCGCACTTCGAGGCTTCCAACTCCGCCTCCTCCGACCAGGATTCCCAAATTGCCCCTCCCTCCTCCTACGGCTCCTCCGGCAATTCCGTCATTTCACCTCTCCGCCTCCCTCGCCTTGTCCTCTCCCTCGGCGGTAGAAGGAAGGGCGCCCCACAAAGAGCCCCTCTTTCTTAG 648 0.5448 MMNDRSGKPAWLERLMAETFFGGCGVHQNHRKNEKNVFCLHCSLSICPHCLPSHPSHPLLQVRRYVYHDVVRLGDLEKLIDCSNIQAYTINGAKVIFLKQRPQSRPCKGSSNACCTCDRILQDPFLFCSLSCKVDHMLEEGEDLSGILHQFQESDFTYSHFEASNSASSDQDSQIAPPSSYGSSGNSVISPLRLPRLVLSLGGRRKGAPQRAPLS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1301 215 ProSiteProfiles Zinc finger B-box type profile. 24 73 IPR000315 GO:0008270
Prci3g1301 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 214 - -
Prci3g1301 215 MobiDBLite consensus disorder prediction 167 189 - -
Prci3g1301 215 Pfam PLATZ transcription factor 63 134 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1301 Prci-Chr3 19539742 19546320 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Prci3g1301 PLATZ 5.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1301 - - pcin:129304528 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1301 3 19539742 19546320 Prci3g1301 3 19539742 19546320 ECH