Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1209 ATGGGGGATTTGCGCGACTCTCTCTCGCCTCCTGCGAACCATTCGCGCCCGATGGCCGTCCGCGAAGATTGCTGGACCGAGGAAGCTACCTCCACCCTCGTTGACGCTTGGGGTCGCCGTTATTTACAGCTCAACCGCGGCAACCTCCGTCAGAAGGACTGGCAGGATGTCGCTGACGCTGTCAACGTTCTCCATGGTCATACCAAGAAGACGCATCGGACAGATGTTCAGTGCAAGAACCGCATTGATACTATTAAGAAGAAGTATAAGTCTGAGAAGAATAGGGTTTCCTCCCCAAACGGGTCTCCTTCCGCCTGGCCCTTCTTCGATCGCTTAGACATTTTGATTGGGCCCGCTTTGAGTGCGAAAAGGGCGTCCTCGTTGCCTTCGGTGGCTCTTCCTTTGCCGTCTCGTAAAACCCCGTCCCCCGCATCTGCGGTGCCCGCGACGGCCTTAGCACTACCGCAGAAGCGGTCGGCGGCAGCACTATTAGAGGATGGATACTTCAGGAGGAATTATTCAGCTATGGCAGCTGCGGCAGCTGCAGCAGAGGCTGATGATGATGAGGAGGAAGAGGAGGAGGAGGGGGATGATGAAGATGAAGAGAGGGTAAGCGAGGTTGAGGAAGGAGAGAGGGAGAAGGGAGGGGTGAGGATGTTGGCAAAAGCAATAGAGAGGTTTGGGGAAGTTTATGAGAGAATGGAGAGAGAAAAATTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTACTAAAGATCTGGAAGTACAAAGGATGCAGATGTTTATGGAAACGCAGGTTCAGCTGGGGAGGGTCAAACGCGGGAAGCGATCTGGGTCTAATGATATCCTGCAAGAAAGCATATTTACGAGCTAG 882 0.5317 MGDLRDSLSPPANHSRPMAVREDCWTEEATSTLVDAWGRRYLQLNRGNLRQKDWQDVADAVNVLHGHTKKTHRTDVQCKNRIDTIKKKYKSEKNRVSSPNGSPSAWPFFDRLDILIGPALSAKRASSLPSVALPLPSRKTPSPASAVPATALALPQKRSAAALLEDGYFRRNYSAMAAAAAAAEADDDEEEEEEEGDDEDEERVSEVEEGEREKGGVRMLAKAIERFGEVYERMEREKLRQMVDLEKQRMQFTKDLEVQRMQMFMETQVQLGRVKRGKRSGSNDILQESIFTS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1209 293 MobiDBLite consensus disorder prediction 180 215 - -
Prci3g1209 293 Pfam Myb/SANT-like DNA-binding domain 22 113 IPR044822 -
Prci3g1209 293 MobiDBLite consensus disorder prediction 1 20 - -
Prci3g1209 293 Coils Coil 182 202 - -
Prci3g1209 293 Gene3D - 25 91 - -
Prci3g1209 293 MobiDBLite consensus disorder prediction 183 206 - -
Prci3g1209 293 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 278 IPR044823 -
Prci3g1209 293 FunFam trihelix transcription factor ASIL2 25 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1209 Prci-Chr3 15540866 15547078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1209 21 284 Trihelix Transcription Factor Family AT3G14180 34.188 9.41e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci3g1209 Myb_DNA-bind_4 1.2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1209 - - qsa:O6P43_012770 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1209 3 15540866 15547078 Prci3g1209 3 15540866 15547078 ECH