Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1208 ATGGGGGATTTGCGCGACTCTCTCTCGCCTCCTGCGAACCATTCGCGCCCGATGGCCGTCCGCGAAGATTGCTGGACCGAGGAAGCTACCTCCACCCTCGTTGACGCTTGGGGTCGCCGTTATTTACAGCTCAACCGCGGCAACCTCCGTCAGAAGGACTGGCAGGATGTCGCTGACGCTGTCAACGTTCTCCATGGTCATACCAAGAAGACGCATCGGACAGATGTTCAGTGCAAGAACCGCATTGATACTATTAAGAAGAAGTATAAGTCTGAGAAGAATAGGGTTTCCTCCCCAAACGGGTCTCCTTCCGCCTGGCCCTTCTTCGATCGCTTAGACATTTTGATTGGGCCCGCTTTGAGTGCGAAAAGGGCGTCCTCGTTGCCTTCGGTGGCTCTTCCTTTGCCGTCTCGTAAAACCCCGTCCCCCGCATCTGCGGTGCCCGCGACGGCCTTAGCACTACCGCAGAAGCGGTCGGCGGCAGCACTATTAGAGGATGGATACTTCAGGAGGAATTATTCAGCTATGGCAGCTGCGGCAGCTGCAGCAGAGGCTGATGATGATGAGGAGGAAGAGGAGGAGGAGGGGGATGATGAAGATGAAGAGAGGGTAAGCGAGGTTGAGGAAGGAGAGAGGGAGAAGGGAGGGGTGAGGATGTTGGCAAAAGCAATAGAGAGGTTTGGGGAAGTTTATGAGAGAATGGAGAGAGAAAAATTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTACTAAAGATCTGGAAGTACAAAGGATGCAGATGTTTATGGAAACGCAGGTTCAGCTGGGGAGGGTCAAACGCGGGAAGCGATCTGGGTCTAATGATATGTATTGCTAG 864 0.5336 MGDLRDSLSPPANHSRPMAVREDCWTEEATSTLVDAWGRRYLQLNRGNLRQKDWQDVADAVNVLHGHTKKTHRTDVQCKNRIDTIKKKYKSEKNRVSSPNGSPSAWPFFDRLDILIGPALSAKRASSLPSVALPLPSRKTPSPASAVPATALALPQKRSAAALLEDGYFRRNYSAMAAAAAAAEADDDEEEEEEEGDDEDEERVSEVEEGEREKGGVRMLAKAIERFGEVYERMEREKLRQMVDLEKQRMQFTKDLEVQRMQMFMETQVQLGRVKRGKRSGSNDMYC 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1208 287 Gene3D - 25 91 - -
Prci3g1208 287 MobiDBLite consensus disorder prediction 180 215 - -
Prci3g1208 287 MobiDBLite consensus disorder prediction 1 20 - -
Prci3g1208 287 Coils Coil 182 202 - -
Prci3g1208 287 Pfam Myb/SANT-like DNA-binding domain 22 113 IPR044822 -
Prci3g1208 287 MobiDBLite consensus disorder prediction 183 206 - -
Prci3g1208 287 FunFam trihelix transcription factor ASIL2 25 91 - -
Prci3g1208 287 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 278 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1208 Prci-Chr3 15540866 15547078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1208 21 286 Trihelix Transcription Factor Family AT3G14180 33.994 7.00e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci3g1208 Myb_DNA-bind_4 1.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1208 - - qsa:O6P43_031940 374.015