Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1202 ATGGCGTCGACTAAGGAACATGAAAGCTTTGTCTACGTCGCTAAGCTTGCTGAGCAAGCTGAGCGCTATGAAGAAATGGTGGATGCCATGAAAAAGGTTGCTGAGCTCAATGTTGAATTAACGGTTGAAGAGCGAAACCTTCTCTCAGTTGGGTATAAGAATGTAGTGGGTGCAAGGAGAGCTTCTTGGAGGATTCTGTCTTCGATTGAGCAGAAAGAGGAAGCAAAAGGGAACAATCTGAGTGTGCAACGTATAAAGGATTATAGACAAAAGGTGGAGTCGGAGTTGTCAAATATTTGCAGCGATATTATGACTGTTATGGATGAGCATCTTATTCCCTCTTGCTCTGGTGGTGAATCCAGCGTGTTTTTCTACAAAATGAAAGGTGACTATTATCGGTATCTGGCGGAGTTTAAATCTGGTGATGAGAGAAAAGAAGCAGCTGATCAGTCCATGAAAGCATATCAGACAGCTTCCTCTACAGCTGAGGCTGAGTTACCTCCCACCCATCCCATCAGGCTGGGTTTGGCTTTGAATTTCTCTGTATTTTATTATGAAATTTTGAACTCCCCTGAAAGAGCCTGTCACCTTGCAAAGCAGGCCTTTGACGAAGCAATCGCAGAGTTGGATACTTTGAGTGAGGAGTCTTACAAGGACAGCACATTGATTATGCAACTTCTAAGAGACAATCTCACTTTGTGGACATCCGATATTCCTGAAGATGGAGCTGAAGAACAGAAGGAGTCCAACCGTGCCGTTGGAGGTGAAGATGCTGAGTAA 780 0.441 MASTKEHESFVYVAKLAEQAERYEEMVDAMKKVAELNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNNLSVQRIKDYRQKVESELSNICSDIMTVMDEHLIPSCSGGESSVFFYKMKGDYYRYLAEFKSGDERKEAADQSMKAYQTASSTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGAEEQKESNRAVGGEDAE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1202 259 SMART 1433_4 7 248 IPR023410 -
Prci3g1202 259 PANTHER 14-3-3 PROTEIN 8 238 IPR000308 -
Prci3g1202 259 Coils Coil 13 46 - -
Prci3g1202 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Prci3g1202 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Prci3g1202 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Prci3g1202 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Prci3g1202 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Prci3g1202 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Prci3g1202 259 Coils Coil 195 215 - -
Prci3g1202 259 Pfam 14-3-3 protein 14 235 IPR023410 -
Prci3g1202 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Prci3g1202 259 Gene3D - 1 249 IPR036815 -
Prci3g1202 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Prci3g1202 259 MobiDBLite consensus disorder prediction 237 259 - -
Prci3g1202 259 MobiDBLite consensus disorder prediction 240 259 - -
Prci3g1202 259 PIRSF 14-3-3 1 249 IPR000308 -
Prci3g1202 259 FunFam 14-3-3 protein epsilon 2 248 - -
Prci3g1202 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1202 Prci-Chr3 15451569 15455234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1202 1 259 14-3-3 family AT2G42590 76.806 9.67e-154 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1202 K06630 - gmx:100807980 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1202 3 15451569 15455234 Prci3g1202 3 15451569 15455234 ECH