Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1111 ATGGCTATTCATGGGAATCAAGATTCAGCTTCTGAAGGCATTCTTGAGAACGTGTGGGCTAAAATCATTGACAGCAATAATGGATCACAATGGAAAGAACTTCCTAATCTAGATGGAAGAGAAGAGTCTATGGAAGTTCTGAGAAGACTTCCTAGTTTAGGAAGATGGATATCAATGGGAGCTGATTTCTGGGAAGAAATCTTAGATGGGTTTCCAGATTGTCACAGTAAAAGTGCTGAAATTTGCAGTGCCTTTGAAAGCAATAAGAAGGTTGAAGAAGAACTAGAAGAAGAAGAAGAAGCAGTGAGAGTGAAAGCAGAGAAGAAGGTAGCTGCAAAACACTTCAGAGGAGTGAGGAGAAGGCCATGGGGGAAATACGCAGCAGAAATCAGAGACTCATCAAGGAAAGGAGCTAGGGTTTGGCTTGGAACTTTTGACACAGCTGAGGAAGCAGCTTTGGCTTATGATAAGGCTGCTTTGAGAATTAGAGGCCAAAAGGCATGCCTGAATTTCCCACTTGAGACTGTTTCAAAGGCCTCATCAGGATTTGACCAGAAAGGAAACTGTCAAGAAAATTTCCGCAGTTCCACAAAGAGAAGGTGTAGGGAGACAGATGCGCTTGCTGGTGTGATGAATGAAGAACGTGCAAAGAAGAAAATGACAAGCTTGGGAGGGGTGACAGGGAATGAAGATGATGTTTTTGAGTTTCAGGACCTGGGAAGTGATTATTTAGAAAGCTTGTTATCTTCCTTTTGA 756 0.4246 MAIHGNQDSASEGILENVWAKIIDSNNGSQWKELPNLDGREESMEVLRRLPSLGRWISMGADFWEEILDGFPDCHSKSAEICSAFESNKKVEEELEEEEEAVRVKAEKKVAAKHFRGVRRRPWGKYAAEIRDSSRKGARVWLGTFDTAEEAALAYDKAALRIRGQKACLNFPLETVSKASSGFDQKGNCQENFRSSTKRRCRETDALAGVMNEERAKKKMTSLGGVTGNEDDVFEFQDLGSDYLESLLSSF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1111 251 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Prci3g1111 251 PRINTS Ethylene responsive element binding protein signature 138 154 IPR001471 GO:0003700|GO:0006355
Prci3g1111 251 Pfam AP2 domain 114 164 IPR001471 GO:0003700|GO:0006355
Prci3g1111 251 Gene3D AP2/ERF domain 113 174 IPR036955 GO:0003700|GO:0006355
Prci3g1111 251 SUPERFAMILY DNA-binding domain 114 174 IPR016177 GO:0003677
Prci3g1111 251 Coils Coil 88 108 - -
Prci3g1111 251 FunFam Ethylene-responsive transcription factor 2 113 174 - -
Prci3g1111 251 SMART rav1_2 114 178 IPR001471 GO:0003700|GO:0006355
Prci3g1111 251 CDD AP2 113 172 IPR001471 GO:0003700|GO:0006355
Prci3g1111 251 ProSiteProfiles AP2/ERF domain profile. 114 172 IPR001471 GO:0003700|GO:0006355
Prci3g1111 251 PANTHER DNA-BINDING DOMAIN 94 246 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1111 Prci-Chr3 14264239 14265185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1111 5 251 AP2-EREBP Transcription Factor Family AT4G18450 35.202 2.88e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci3g1111 AP2 9.1e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1111 - - gmx:100820226 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1111 3 14264239 14265185 Prci3g1111 3 14264239 14265185 ECH