Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1110 ATGGTTTTGTCATCCCAGACAGACCTTCCTTTCAACGAGAACGACTCACAAGACATGGTCATATACCAAGTCCTCCACGAGGCCAATACTCTTCACACCGCCGCCGCCGCCGCCGCCGCCACCTCCTCATCCTCCTCCGCCACCGCCGACGCCGCCACATTCATCCAGCAAAGGCAACAAACCTCCGTACGGAACGTGCTCGAGCCATCCAGGACCGTCGGAAAGAAGCATTACAGAGGCGTGAGGCGGAGGCCGTGGGGGAAGTACGCGGCGGAGATCCGCGACTCTGCCAGGCACGGAGCACGCGTGTGGCTGGGTACGTTCGAAACCGCCGAGGAAGCCGCCATGGCTTACGATCGAGCGGCTTTTAGAATGAGAGGAAGATTGTGTAATCAAGATTCAGATTCAAGTGCTAGCAGCAGCTCCTGCGTTAATTCCATTGGAACAAATGGAACCTTCTTAGAAAGCACAAGCAGCACAGACAGTTAG 489 0.5644 MVLSSQTDLPFNENDSQDMVIYQVLHEANTLHTAAAAAAATSSSSSATADAATFIQQRQQTSVRNVLEPSRTVGKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAAMAYDRAAFRMRGRLCNQDSDSSASSSSCVNSIGTNGTFLESTSSTDS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1110 162 Pfam AP2 domain 77 127 IPR001471 GO:0003700|GO:0006355
Prci3g1110 162 CDD AP2 76 128 IPR001471 GO:0003700|GO:0006355
Prci3g1110 162 Gene3D AP2/ERF domain 76 132 IPR036955 GO:0003700|GO:0006355
Prci3g1110 162 MobiDBLite consensus disorder prediction 133 162 - -
Prci3g1110 162 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Prci3g1110 162 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Prci3g1110 162 ProSiteProfiles AP2/ERF domain profile. 77 135 IPR001471 GO:0003700|GO:0006355
Prci3g1110 162 SMART rav1_2 77 139 IPR001471 GO:0003700|GO:0006355
Prci3g1110 162 PANTHER DNA-BINDING DOMAIN 37 128 IPR044808 GO:0003700|GO:0009873
Prci3g1110 162 SUPERFAMILY DNA-binding domain 77 129 IPR016177 GO:0003677
Prci3g1110 162 FunFam Ethylene-responsive transcription factor 2 76 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1110 Prci-Chr3 14258358 14259474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1110 9 127 AP2-EREBP Transcription Factor Family AT5G47220 47.899 2.35e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci3g1110 AP2 2.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1110 K13433 - qsu:112020158 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1110 3 14258358 14259474 Prci3g1110 3 14258358 14259474 ECH