Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1109 ATGGTTTTGTCATCCCAGACAGACCTTCCTTTCAACGAGAACGACTCACAAGACATGGTCATATACCAAGTCCTCCACGAGGCCAATACTCTTCACACCGCCGCCGCCGCCGCCGCCGCCACCTCCTCATCCTCCTCCGCCACCGCCGACGCCGCCACATTCATCCAGCAAAGGCAACAAACCTCCGTACGGAACGTGCTCGAGCCATCCAGGACCGTCGGAAAGAAGCATTACAGAGGCGTGAGGCGGAGGCCGTGGGGGAAGTACGCGGCGGAGATCCGCGACTCTGCCAGGCACGGAGCACGCGTGTGGCTGGGTACGTTCGAAACCGCCGAGGAAGCCGCCATGGCTTACGATCGAGCGGCTTTTAGAATGAGAGGTGCGAAGGCCTTACTCAATTTTCCAGCAGAAATCGTAGCTTCTTCCATGGACATGTCTAGTGATTCTAACAAGCCTGGTTTGATGAGCTCCTCAGGAAGATTGTGTAATCAAGATTCAGATTCAAGTGCTAGCAGCAGCTCCTGCGTTAATTCCATTGGAACAAATGGAACCTTCTTAGAAAGCACAAGCAGCACAGACAGTTAG 585 0.547 MVLSSQTDLPFNENDSQDMVIYQVLHEANTLHTAAAAAAATSSSSSATADAATFIQQRQQTSVRNVLEPSRTVGKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAAMAYDRAAFRMRGAKALLNFPAEIVASSMDMSSDSNKPGLMSSSGRLCNQDSDSSASSSSCVNSIGTNGTFLESTSSTDS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1109 194 SMART rav1_2 77 141 IPR001471 GO:0003700|GO:0006355
Prci3g1109 194 SUPERFAMILY DNA-binding domain 77 137 IPR016177 GO:0003677
Prci3g1109 194 FunFam Ethylene-responsive transcription factor 2 76 137 - -
Prci3g1109 194 Gene3D AP2/ERF domain 76 137 IPR036955 GO:0003700|GO:0006355
Prci3g1109 194 Pfam AP2 domain 77 127 IPR001471 GO:0003700|GO:0006355
Prci3g1109 194 ProSiteProfiles AP2/ERF domain profile. 77 135 IPR001471 GO:0003700|GO:0006355
Prci3g1109 194 PANTHER DNA-BINDING DOMAIN 38 168 IPR044808 GO:0003700|GO:0009873
Prci3g1109 194 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Prci3g1109 194 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Prci3g1109 194 MobiDBLite consensus disorder prediction 143 194 - -
Prci3g1109 194 CDD AP2 76 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1109 Prci-Chr3 14258358 14259474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1109 9 144 AP2-EREBP Transcription Factor Family AT5G47220 47.059 1.35e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci3g1109 AP2 2.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1109 K13433 - qsu:112020158 188.734