Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1106 ATGCACCAATTCAAGAGTGACCTCAATAATATTAGCAAGCATGAATTTGGAGGCAAGCTGTCTTCAGATATCCAGTTTTTATCTGAGTTAGAGACTTTGGATCTCTCTAACAACAAGGGCCTGACAGGAACAATTCCGAAAGAGATTGGAAATATGAAAAAATTAAAAGCCCTTATATTGGTTGGATGTAATTTCTTTGGCAGTATTCCAGATTCAATCGGATCTTTGCAGCAGCTGAATTTTCTAGCTCTGAACTCTAATCAGTTCAGTGGAAACATTCCACCTACCATAGGCAATCTATCCAATATTAATTGGCTAGACCTTTCTGATAACCAGCTTGAAGGACCTATCCCTGTCTCTGAAAAAGGAGTGCTTGGACTTGACAAGCTGCTTAAGGCACAGCACTTTCACATGGGAAACAATAGGCTCTCGGGTGGAATTCCAGCTGAACTTTTTAGTCCAAATATGAGTCTCGTCCATGTGCTTTTCGACAGCAATCAACTAAGTGGCAGTATTCCTGGTACCCTTGGGCTGGTGAACTCTTTGGAGGCGGTCCGTTTTGATAGGAACCAATTAAGTGGGAGAGTGCCTTCAAACATCAGCAATCTCAAAAATCTTGGTGATCTGTATTTATCAAATAATAGGTTGAATGGTTCTCTGCCAGATCTTACTGGAATGAATCTTCTAGCCTATGTGGATCTGAGTAACAATAGTTTCAGTTCTTCTGTTATTCCTTCATGGGCTTCAAGTCTGCCGTCTTTGACAACATTAAAATTGGAGAACATCAGCCTTCAAGGGGAGATTCCTGTCTCCTTATTCAACCAATCCAGTCTAGAGTCTGTGGTATTGAGGGGCAACCATCTCAATGGCACCTTAGATATTGGCAATGCCAACAGCAACCGCTTGAAACTCATTGATTTGGAGCATAATTCAATTACTGACTTCACGCAGAAAAACATGAACTATAAAGTTTCAGTAGTACTAGTTAGCAACCGGATTTGCCTTGAAAACGGAGCTTCTGCTAAAATCTACTGCCAAGAACCCCAATCCAATTCCGTATATTCAACACCACCAGATAATTGCGCACCTCTTCCTTGCAGTTCTGGTCAGATTTCTAGTCCTAGCTGCAAATGTTCATATCCCTACACTGGAACTCTATACGCCAGAGCTCTTAGTTTCTCAGACTTCGTATTCCCGTCTTCAAGTGATCGTTTCAATAGAACTGGAGTTTCAAGTATTGCTTTCGTGATTAGTAGCCAGCTTCTTAAGTTGCCAAAATTTTTCCTTCCTTACTTCTTTATTGGTGACGACTACGGGTACTTTGCAGGAGATAAGTCAAAGTCATCACATACAAGGGTTATAGTTGGTGCAGTTGTCGCAGTTGTGGTCTTTTTGGTACTAGCACTCATTGCGGGGATATATGCTATACGCCAAAAGAAAAGAGCAAAAGGAGCTGCCGAACTAAACCCTTTTGTAAACTGGGAACTGAACAAGAACACTGGCAAGGCTCCTCAGTTAAAAGGAGCACGATGGTTTTCTTTAGAAGAGCTAAAGAAATACTCCAACAACTTCTCAGAAGACAACACCGTTGGATCTGGAGGCTATGGAAAGGTTTACCGAGCTGTTCTGCCCACTGGAGAATTTGTTGCCATCAAACGGGCCGCAAAAGAATCCATGCAGGGTGCTGTAGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTTGTTGGTCTTGTCGGTTTCTGTTTTGACAAAGGTGAACAAATGCTGGTGTATGAGTATATTCCAAATGGCACTTTAATGGATAGTCTCTCAGGAAAGTCTGGGATCAGAATGGATTGGATGAGGAGGCTTAAAGTAGCCCTGGGTGCAGCCAGGGGTCTGGCCTATCTTCATGAACTTGCCAACCCACCCATCATACACAGGGACATAAAATCAAGCAATATTCTACTTGATGAGCACCTTAATGCGAAAGTTGCAGATTTTGGACTCTCCAAGCTTCTTGTTGACAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGTTACTTGGATCCTGAGTATTACATGACCCAACAGTTAACTGAAAAAAGTGATGTATATAGCTTTGGAGTGCTGATGCTGGAATTGGTGACGGCAAGAAGGCCAATAGAGAAAGGGAAGTACATTGTGAGAGAGGTGCAGAAGGTGATGGACACGTCAAAAGAACTATTCAACCTACATTCCATCATAGATCCATCCATCAGCAAAGCTACAACTCCACATGGTTTGGAGAGGTTTGTGGAAGTGGCAATGAGGTGTGTCAAAGAATATGCAGCAGAGAGGCCATCAATGGCTGAGGTGGTAAAAGAAGTCGAGAATATAATGGAGCTTGCTGGTCTGAACCCCACTTCTGAATCAGATCCAACTACAGAAGAAATTGATGTGGACGCAAGTGGGGGCAATTTACGCCATCCTTATAGCCATGAAGGTTTTAGCTATAGTGGAATCTTTCCTTCAACAAAGGTAGAGCCTCAGTGA 2544 0.4249 MHQFKSDLNNISKHEFGGKLSSDIQFLSELETLDLSNNKGLTGTIPKEIGNMKKLKALILVGCNFFGSIPDSIGSLQQLNFLALNSNQFSGNIPPTIGNLSNINWLDLSDNQLEGPIPVSEKGVLGLDKLLKAQHFHMGNNRLSGGIPAELFSPNMSLVHVLFDSNQLSGSIPGTLGLVNSLEAVRFDRNQLSGRVPSNISNLKNLGDLYLSNNRLNGSLPDLTGMNLLAYVDLSNNSFSSSVIPSWASSLPSLTTLKLENISLQGEIPVSLFNQSSLESVVLRGNHLNGTLDIGNANSNRLKLIDLEHNSITDFTQKNMNYKVSVVLVSNRICLENGASAKIYCQEPQSNSVYSTPPDNCAPLPCSSGQISSPSCKCSYPYTGTLYARALSFSDFVFPSSSDRFNRTGVSSIAFVISSQLLKLPKFFLPYFFIGDDYGYFAGDKSKSSHTRVIVGAVVAVVVFLVLALIAGIYAIRQKKRAKGAAELNPFVNWELNKNTGKAPQLKGARWFSLEELKKYSNNFSEDNTVGSGGYGKVYRAVLPTGEFVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFDKGEQMLVYEYIPNGTLMDSLSGKSGIRMDWMRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDEHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEKGKYIVREVQKVMDTSKELFNLHSIIDPSISKATTPHGLERFVEVAMRCVKEYAAERPSMAEVVKEVENIMELAGLNPTSESDPTTEEIDVDASGGNLRHPYSHEGFSYSGIFPSTKVEPQ 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1106 847 ProSitePatterns Protein kinases ATP-binding region signature. 530 556 IPR017441 GO:0005524
Prci3g1106 847 FunFam Leucine-rich repeat protein kinase family protein 493 599 - -
Prci3g1106 847 Gene3D Transferase(Phosphotransferase) domain 1 600 815 - -
Prci3g1106 847 Gene3D Ribonuclease Inhibitor 225 334 IPR032675 -
Prci3g1106 847 CDD STKc_IRAK 530 796 - -
Prci3g1106 847 Gene3D Phosphorylase Kinase; domain 1 494 599 - -
Prci3g1106 847 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 600 809 - -
Prci3g1106 847 FunFam Leucine-rich repeat protein kinase family protein 123 222 - -
Prci3g1106 847 MobiDBLite consensus disorder prediction 802 823 - -
Prci3g1106 847 ProSiteProfiles Protein kinase domain profile. 524 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1106 847 PANTHER RECEPTOR-LIKE PROTEIN 55 38 796 - -
Prci3g1106 847 FunFam Nuclear pore complex protein NUP107 5 119 - -
Prci3g1106 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Prci3g1106 847 SUPERFAMILY Protein kinase-like (PK-like) 510 805 IPR011009 -
Prci3g1106 847 SUPERFAMILY L domain-like 18 325 - -
Prci3g1106 847 Pfam Protein kinase domain 525 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1106 847 SMART serkin_6 524 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g1106 847 ProSiteProfiles Leucine-rich repeat profile. 205 227 IPR001611 GO:0005515
Prci3g1106 847 Gene3D Ribonuclease Inhibitor 5 224 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1106 Prci-Chr3 14208251 14216334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1106 18 847 Receptor kinase-like Gene Family AT5G49760 54.473 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Prci3g1106 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1106 - - gmx:100786172 1061.21