Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1100 ATGGCTTTCAATCAAGTCAAGGTAGAAGCAGAATTGTTTCAAGCTCAGTCCCATCTGTATAAACACGTATTCAATTTCTTGAGCTCCATGTGTCTCAAGAGTGCTCTGCAGCTGAACATACCAGACATAATCCACGGCCATGGCAGACCCATCACCCTCCCTGAGCTGCTCTCCACTCTTCAAATGGACCCTGCAAAATCTTCTTATCTCTATAGGCTCATGCGCATACTGGTTCACTCTGGCTTCTGCACCACTTCCAAAGTCCCTAAAGGTGATGGGGAAGAAGAGGGATACAACCTCACACCTTCCTCTAGGCTCCTCCTCAAAGGCAATATCCCAAGCTTGTCTACTTTCGTTCAGGCAATGTTTCATCCAGCTATAGTGCACTCATCGGAATCCTTGGGAGATTGGTTTATCAGTGATGAGCCCACCCCCTTTCACACTGCACATGGGATGGGATTCTGGGACTATCTCAGCCAAAACCAGGAGTTTAACAGGCTCTTTAATGAAGCTTTGATTAGTGATTCAAGTATGATGAATTTAGTAATTAAAGATTGCAAATCAGTCTTTGAGGGATTCGATTCATTGGTTGATGTTGGGGGTGGCAAAGGAGCTGCGTCTAGGATCATATCCGAATCACTGCCTAATCTGTGGTGTACTGTGCTAGATTTTCCACATGTTGTTGAAAACTTGCAAGACAGCAGAAATTTGAAATTCGTTGGAGGGGATATGTTTCATTCTATTCCCACAGCAGATGCCATTCTTCTTAAGTTGGTTTTACACGCTTATAGTGATGAAGACTGCGTAAAGGTTCTCAAGAAGTGCAGGGAAGCCATTGCATGCAAAGGCAAAGGAGGGAAAGTGATTATTATAGACATAGTGATTGAGAAGAAAGATGAAGGCGATCTGAAAGATGCGAAGCTGTTCTTCGATGTGTTGATGATGGCTGTGGTCGCTGGAAGAGAGAGAGAAGAAAAAGAATGGGAGAAGCTGTTCCTGGAAGCTGGGTTCAGTCACTACAAGATAACACCTATCCTTGGTGTAAGATCACTTATTGAAGTTTATCCTTGA 1071 0.4388 MAFNQVKVEAELFQAQSHLYKHVFNFLSSMCLKSALQLNIPDIIHGHGRPITLPELLSTLQMDPAKSSYLYRLMRILVHSGFCTTSKVPKGDGEEEGYNLTPSSRLLLKGNIPSLSTFVQAMFHPAIVHSSESLGDWFISDEPTPFHTAHGMGFWDYLSQNQEFNRLFNEALISDSSMMNLVIKDCKSVFEGFDSLVDVGGGKGAASRIISESLPNLWCTVLDFPHVVENLQDSRNLKFVGGDMFHSIPTADAILLKLVLHAYSDEDCVKVLKKCREAIACKGKGGKVIIIDIVIEKKDEGDLKDAKLFFDVLMMAVVAGREREEKEWEKLFLEAGFSHYKITPILGVRSLIEVYP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1100 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Prci3g1100 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 356 IPR016461 GO:0008168
Prci3g1100 356 Pfam O-methyltransferase domain 133 338 IPR001077 GO:0008171
Prci3g1100 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 355 IPR029063 -
Prci3g1100 356 Gene3D - 3 107 IPR036388 -
Prci3g1100 356 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Prci3g1100 356 FunFam O-methyltransferase ZRP4 109 356 - -
Prci3g1100 356 Gene3D Vaccinia Virus protein VP39 109 356 IPR029063 -
Prci3g1100 356 PANTHER O-METHYLTRANSFERASE 11 341 IPR016461 GO:0008168
Prci3g1100 356 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Prci3g1100 356 SUPERFAMILY "Winged helix" DNA-binding domain 8 110 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1100 Prci-Chr3 14126869 14128293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1100 30 342 Monolignol Biosynthesis Gene Families AT5G54160 34.277 1.13e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1100 K22588 - qsa:O6P43_012698 473.396