Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1097 ATGGGTTTGATCGATCTCAACACCACTGAGGACGACGAAACGCCGTCGTCGGGTTCCTCTGCTTCATTGTCTTCTCATTCGGGTATTAGCACTTCGGCTTCCACATCTCCTGCTCCTTCGACTGTGTGCTTGGAGCTATGGCACGCGTGCGCCGGTCCAATGATCTCGTTGCCCAAAAAGGGAAGCATCGTGGTTTACTTCCCACAGGGCCAGCTTGAGCAGCAGGTTCAGGATTTTCCGGTCTCTGCCTATAATATCCCACCCCATGTTTTCTGTCGCGTTGCAGATGTCAAGCTCCATGCGGAGGAAGGTATCGATGAGGTGTACTGTCAGGTATCGCTGGTTCCTGAAAGTGAGCAAGCCGAGAGAAGACTACGGGAAGGTGAAATCGATGCTGACTGTGAAGATGAGGATGCTGCAGCTGCAGTGAAGTCAACAACACCGCATATGTTCTGTAAGACCCTGACGGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTGCCTCGGCGGGCAGCTGAAGATTGCTTTCCTCCGCTGGATTACAATCAACAGCGTCCTTCACAAGAGCTTGTGGCAAAGGATCTGCATGGCCTGGAATGGAGGTTCAGGCATATATACAGGGGGCAGCCTCGCAGGCATTTGCTTACAACTGGTTGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGCTGTTTCTGAGGGGTGAGGATGGAGTTCTGAGATTAGGCATTCGCAGGGCATCTCAGTTGAAATGTGGTGGTAGCTTATCAGTTCCATCTGGCTTGCATCTTAATCCTAATAGTTTTATCGATGTGGTGAATGCAATATCTACGAAGTGTGCCTTTAGTGTTTGCTATAATCCAAGGGTTAGCTCCTCAGAGTTCATAATACCACTCAACAAATATTTGAAGAGCCTTGATCAATTCTATTCTGTTGGAATGAGGTTCAGAATGCGTTTTGAAAGTGAAGATGCTGCAGAACGAAGATGCACGGGATTGGTTATTGGCATTAGTGATGCAGATCCTGTTAGATGGCCTGGATCCAAGTGGAGATGCCTTATGGTTAGGTGGGAAGACATGGAAGGCACTAGGCATAACAGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTGCTTCCACTCCCAACAACTTCAACGCAGCTGGTTTAAAGAGGACCAGGATTGGTTTGTCTTCTTCAAAACAAGAATTTCCAGTTCCAAATGGGATTGGAACATCGGACTTTGGGGAATCGATGAGGTTCCAGAAGGTCTTGCAAGCAAGAAATTTTGGGTGTTAA 1314 0.4802 MGLIDLNTTEDDETPSSGSSASLSSHSGISTSASTSPAPSTVCLELWHACAGPMISLPKKGSIVVYFPQGQLEQQVQDFPVSAYNIPPHVFCRVADVKLHAEEGIDEVYCQVSLVPESEQAERRLREGEIDADCEDEDAAAAVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGIRRASQLKCGGSLSVPSGLHLNPNSFIDVVNAISTKCAFSVCYNPRVSSSEFIIPLNKYLKSLDQFYSVGMRFRMRFESEDAAERRCTGLVIGISDADPVRWPGSKWRCLMVRWEDMEGTRHNRVSPWEIEPSGSASTPNNFNAAGLKRTRIGLSSSKQEFPVPNGIGTSDFGESMRFQKVLQGXRNFGC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1097 438 Pfam Auxin response factor 278 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Prci3g1097 438 MobiDBLite consensus disorder prediction 1 34 - -
Prci3g1097 438 FunFam Auxin response factor 149 253 - -
Prci3g1097 438 SMART B3_2 151 253 IPR003340 GO:0003677
Prci3g1097 438 SUPERFAMILY DNA-binding pseudobarrel domain 144 253 IPR015300 -
Prci3g1097 438 CDD B3_DNA 149 251 IPR003340 GO:0003677
Prci3g1097 438 MobiDBLite consensus disorder prediction 9 34 - -
Prci3g1097 438 FunFam Auxin response factor 314 385 - -
Prci3g1097 438 Gene3D - 149 252 IPR015300 -
Prci3g1097 438 Gene3D - 314 387 - -
Prci3g1097 438 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 41 405 IPR044835 GO:0003677|GO:0006355|GO:0009725
Prci3g1097 438 ProSiteProfiles B3 DNA-binding domain profile. 151 253 IPR003340 GO:0003677
Prci3g1097 438 Pfam B3 DNA binding domain 151 252 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1097 Prci-Chr3 14094267 14098666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1097 150 436 B3 DNA Binding Superfamily AT2G33860 68.403 6.82e-142 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Prci3g1097 B3 4.1e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1097 K14486 - gmx:100789906 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1097 3 14094267 14098666 Prci3g1097 3 14094267 14098666 ECH