Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1095 ATGACATGGCGTAACGAGTCTAAAGATGAGGATGGGCTTCGATTAGCCAATCCTAAACCCTCCGAGACTCGAATCATAACTTGCCCTTCATGCGGTCACACCCTAGAATTTCAAGATCAGGGTGGCATTCACGAGTTGCCGGGGCTGCCATCTGGAGTGAAGTTTGACCCGAATGAGCAGGAGATATTAGAACACTTGGAAGCAAAAGTTGAGTGTGATGTTCGTAAGCTTCATCCTCTCATCGACCAGTTCATTCCCACTCTTGAAGGCGAGAATGGCATCTGTTATACCCACCCAGAAAAGCTACCGGGAGTAAGCAAAGATGGGCAGATTCGGCACTTCTTCCACAGGCCATCAAAAGCATACACAACAGGGACAAGGAAAAGAAGAAAGGTTCACTCAGACGAAGAAGGAAGCGAGACAAGATGGCACAAAACTGGCAAAACCAGACCAGTCTTGGTTAATGGTGCACTCAAGGGTTTCAAGAAGATACTTGTGCTTTACACCAACTATGGCAGAAAAAGAAAACCCGAGAAGACCAGCTGGGTGATGCATCAGTACCACCTCGGAACCAACGAAGAAGAGAAAGAAGGACAACTCGTGGTCTCCAAGGTTTTCTACCAGACCCAACCTAGACAATGCGGTTCTTCCATTGTTAATCATAACATCATTAAGGATCCTAATAGCTATGAGAAAGCATCCAACGACCAAACGGGGATTAATAATGATCGTGACACGTGCACTGCAATATTGTCCAATAAGAATGGATCATCTGGTGTTTTAGAGTACTACAGTTCTCCTTACATGAGTTATGACCACGTGGTGTTGGGTCATAATAACGTTAGAGAAAGTTCACCTCAACTTATTCCAAACTTGGTTCTCCAAGGTGATGCCTCTTCTTTCTTTTCCTTTAGCAATGGATTGAAGCAAACAAAGACATGA 942 0.4469 MTWRNESKDEDGLRLANPKPSETRIITCPSCGHTLEFQDQGGIHELPGLPSGVKFDPNEQEILEHLEAKVECDVRKLHPLIDQFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHSDEEGSETRWHKTGKTRPVLVNGALKGFKKILVLYTNYGRKRKPEKTSWVMHQYHLGTNEEEKEGQLVVSKVFYQTQPRQCGSSIVNHNIIKDPNSYEKASNDQTGINNDRDTCTAILSNKNGSSGVLEYYSSPYMSYDHVVLGHNNVRESSPQLIPNLVLQGDASSFFSFSNGLKQTKT 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1095 313 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 22 226 IPR044799 GO:0003700
Prci3g1095 313 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Prci3g1095 313 MobiDBLite consensus disorder prediction 128 144 - -
Prci3g1095 313 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Prci3g1095 313 MobiDBLite consensus disorder prediction 123 144 - -
Prci3g1095 313 FunFam NAC domain-containing protein 73 58 212 - -
Prci3g1095 313 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Prci3g1095 313 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1095 Prci-Chr3 14062819 14066863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1095 1 226 NAC Transcription Factor Family AT4G28500 67.932 1.20e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci3g1095 NAM 1.1e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1095 3 14062819 14066863 Prci3g1095 3 14062819 14066863 ECH