Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1090 ATGGAGGCCGAGGATGCTTCAGACGGGGAGAATAATCGGAAGATGGATACCGGTGATGATTACAATGACAACGATAATGGAAGTAACAAAAAAGCCCTTAATTCTAATGAAGGGCACAGCAAGCCTAAGCGGCAGATGAAGACCCCTTTCCAGCTTGAGTCCCTGGAGAAAGCTTATGCTTTGGAGACGTACCCGTCGGAGGCGATGAGGGCAGAACTGTCGCAGAAGTTGGGGCTGTCGGATCGGCAATTACAGATGTGGTTCTGCCATAGGAGGTTGAAAGACAAGAAGGACGTGCCAAAGCCTTCACGGAAGGCGCCAGCGCCATTGCCCACCTCGCCGACAGACGAGCTGAGAATGGAGACTGAACTCGCCAACGATTATGGATCCGGGTCGGGTTCAGGCTCAAGCCCGTTCACGCGTTCAGAGATGCGGAATGTAGTACCTAGGGGTGTTCCTGGGTACTACGAGTCGCAGCAGGCTCTAATGGAGCATAGAGCAATTTCTTGTGTGGAGGCACAGTTAGGAGAACTCTTAAGGGAGGATGGACCTATTTTAGGAGTTGAGTTTGATCCATTGCCGCCAGATGCATTTGGAGCACCCATAGCAGTCACTGAGAAGCTGAAGCGGCCTAGTCTTGGCTTTGATAATAAAGTCTATGAAAGACATGACGTTAGATCAAATAAGGCTATGACAAGGGCTTTCCATGAATATCCATTTCTCCCAAACCACTCCAGTATTAGATCTGATGCTTATGGACAATTGGCACAATCTCATTTACATGATTCAATGGATGGTCCTGCTAGAACTCCATCTTTTGTCGTAAAAAATGAACCGGTTCCCAGGATTCATGCTGCCCAAGGTCATTCGTCACGTGTTCGTCTTTCATCTCTACAAGATAAGCAAGGGCTTCCCTATCCATCACCCACCCACGATGATGATGGTCCCTCTCAAAGGGAATCTTACGCAAACCTAAATATTGGAATGAACGCTCACTTTACTGATCACCCAATTGTTGGACCAGAAAACCCTTATGCTGTAGTGGGTGGACAAATTTTCCATAGTGATGCAATATTACGGTTGGACAGGAAACGGAAGAGTGATGATTCTAGAACTGCAAGAGAAGCTGAAGCCCATGAGATGAGAATCCAGAAGGAGATAGAGAAACAAGATAACATTAGGCGAAAGAATGAAGAGAGAATGAGGAAAGAGATGGAGAGGCAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAGAGAGAAGAAGAAAGAACAAAACGTGAGCAAAGACGTGAAATCGAACGGAGGGAAAAGTTTCTGAAAAAGGAAAACTTAAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGCTTCGAAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCTCTTGAGAAAGCAGTTGCCCGCAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAACTGGAATTGATGGAGTTGGCTGTGGCTAGCAAGGGACTTCCCTCAATTATAAATCTTGATCTTGACACGTTGCAAAACCTTGATACTTTTCGGGATTCATTATGCATTTTTCCACCTAAAAGAGTCAAGCTGAAAAGACCATTTTCCATCCAACCCTGGATCAAATCCGAGGAGCATGTTGGCAACCTTCTCATGGTTTGGAGATTTCTGATTACATTTGCAGATGTCCTTGAGTTGTGGCCTTTTACTCTTGATGAGTTTTTGCAGGCATTTCATGACTATGATTCAAGATTATTTGGTGAGATACATGTTGCTCTTCTCAAGGTAATAATAAAAGACATCGAAGATGTTGCAAGGACACCTACAGGGTTAGGTACAAACCAGAATGGGGCTGCTAATCCTGGGGGTGGCCATCCAGAGATTGTGGAAGGGGCGTATGCATGGGGCTTTGATATTAGAAATTGGCAGAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGCTAGCACTGTCTGCAGGGTTTGGACCACGGCTGAAGAAAAGAAATATTACATGGTCGTATGCAACTGATAAAGATGAGCAGGGTAGAAGTTGTGAAGACATCATCTCCACACTTCGCAATGGTTCAGCTGCTGAAAATGCAGTGGCAAAAATGCAAGAGAAAGGTCTACTAGCCCCTCGGAGAAATAGGCACCGGTTGACTCCTGGAACAGTTAAGTTTGCAGCATTTCATGTTTTGTCTCTTGAGGGTAGCAAGGGGTTGACGGTACTAGAGCTTGCAGAGAAAATTCAGAAATCTGGACTTCGGGATCTGACAACCAGCAAGACGCCTGAGGCATCAATTTCTGTTGCTTTGACCAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCTTCAACATATCGAGTTCGAGCTGCATTTAGAAAAGATCCTGCTGATGCAGAGGCCATTCTTTCAGATGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCCTACTGTTGAAGATGCTGATGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGATGAAGTTGACGAGGATCCTGAAGTAGATGATTTAGTAAATCCCCTAAGTGATAACAAAACATCTGAACAGTATGATGACATGAATAATTGCTCTACAAATGGGGGAGAAAATATGACCCACGACATGGAACTTATTCAAAATGAGTTTGGCAAGGATATTCCTTGTGTTCCTGAGAATTGTTCCAAGGATGCTGCTTGCCCAAGTGCTGTAACCAGACAACGGGCTGTTGTTGAAGATTTGAATACTGGAAATCCTGAAGATAATATGGAAATTGATGAAAGCAAGTCTGGAGAGTCATGGGTTCTAGGTCTTACAGAAGGGGAATATTCTGACCTTAGTGTAGAAGAACGTCTTAATGCTCTAGTAGCATTAGTTGGTGTTGCAAATGAAGGAAATTCAATACGTCTTGTTCTTGAGGATCGTTTGGAGGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGGCAGAAAGATGATAACTCTAATAAATCAGATTTTCCATCTCTTACTGCAAATAAAGTTGATACACAATATACAGGCCCTGCTGTGGAGGGAAACCAGAGCCCATTGCTCGACATGAATATTAATAATAATGAGGCATCACCCAGCCCTGCAGAAAATCAGAAAGAAGTTCTTGGTGCACAGAACATGCCTATTGAAAAACCTTCAGTTGGTCAAGATCTCTTCATAGGTCCTGACAACCCGCAGATTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCCTATATTGCACATATAGCAGAAGAGATGTATGTATATAGGTCCTTGCCCCTTGGTCAAGATCGGAGACGTAACCGATATTGGCAATTTGTTGCATCTGCTTCCAGCAGTGATCCTGGTGCTGGCAGGGTCTTCATTGAATTAAATGATGGTAGTTGGAGGCTTATTGATTCTGAAGAGGACTTTGATGTACTTTCAACATCCCTCGATTCACGTGGAATTAGGGAATCCCATTTACGCTTAATGTTGCAGAAGATTGAGAATTCCTTCAAGGAAAATGTTCGAAAGAATGCTCAATTTAAGAAAATTGCAACCAAATCAATTAAAAATGAAGCTGATGATGTAGAATTGGTTCCTGAATGCCGTGCTGGATCAGACAGTTCTAGCAGTACTCTTTGTGGTTTGAATTCTGACAGTACATCGGAAACTTCTTCATCATTTAAAATTGAGCTGGGGAAAGTTGAGAGTGAAAAAAAAGCTGCCGTGATCAAGTATCAAGATATTCAAAAGTGGATGTGGAAAGAATGTTATAATTCATCAACATTATATTCAATGAAATATGGGCAAAGGAGATGCAAGCCACTGCTGGAAATATGTGATATGTGTTTGAATCCATATTTCTTTGAAGATTCCCATTGTAATTCTTGCCACCATACTTTTGCTACTAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTAGAGAGAAGTTAGATACCAAGGGTGTATGTATTTGGGATTCTTCTCTTCCCTTGCGGATAAGGTTGCTCAAGGCTCTGTTGGCTTGTATTGAGGCTTCTGTTCCTCTTGAAGCATTACAATCAATTTGGACAGAAGAGAATAGGAAGCAGTGGGGTGTGAAGTTGAGCAAAACATCTACAACTGATGAACTCTTGCAGCTATTGACCTTGTTGGAGAGGTCAGTACAGCGAGACTTTCTGTCATCAACCTTCTCTACAACAGAAGAAATGTTGGGATCAAGCTGCATGCCTGACAATGCTGTAAATGCTTCTACCGATACTGAATCAGTTCCTGTGCTGCCATGGGTACCACTAACTGCTGCAGCCGTGTCATTGAGAATTTTTGAGTTCGATGCATCCATCAGTTACGTACCAGCTGAGAAACATGAGCCGCAGTTTGAGGAGAAAGAAGTGAGGGAATATGCGAGGCTTTCTTCAAGATATGCTCCCTTCAAATCTGGTAGAGCTATTGAATCAGCAGAATTAGACCATGATGAATTCATCAAGGAAGACAAATCTAGTAGAAGTGTTCGAAGCAGCAATAAACGTGGACGAGGGTCTCATGATCATGGACGGGGCAAGAAGTTGTCTAGAAGAACGCAAGAGCCAAAACAGCACACCGGGCGCCGAAATGTTAGAAGTGCTGAGAATTTGGGTCGAGGATTAAAACAGCAGGGGAGAGGGACACAAGGACAACCAGGTGGACGTGGTCGCCGAACAGTCAGGAAAAGAAGAGTGGAAAAAAGGGCTGTTGAGGACTTATTGCTGGGCCACAAGGGCGTCAGTCATAGTCCCAAAATCAGTAGAGAATCATTGAGAAGTTTGGAAGAGGAATGGGATGGAGAGAAGGAGGCAAGTCCCGTCCAAATAGATGGTGTTGATAACAGTAACAGTGCCGAGGAAGTTGAATCTGATGACAATGGGCAAGCAGTGGAGTATGGGCAAGGAAACTGGGAGGTAGGTTTCAATGGTGGCAGCTCCAATAGATGGGATAGAGATTTGGTTGGAGTGAGTGATGAAGAAGTGGTGGGTGTATCTGAAGATGACAATGGCATTGAAGGAGAGGAGTTGGAGGAGGAGTTGGAGGAGGATTCAGAGGAAGAGGTTATGAGTGAGGGGGAGGATTCAGATGGTGTGGGCAATAGAATGATGGTAAATGAAGAGGGCTCAGACTCAGCTGTCTCTGAGGATTCTTCTGATTAG 5259 0.4351 MEAEDASDGENNRKMDTGDDYNDNDNGSNKKALNSNEGHSKPKRQMKTPFQLESLEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKKDVPKPSRKAPAPLPTSPTDELRMETELANDYGSGSGSGSSPFTRSEMRNVVPRGVPGYYESQQALMEHRAISCVEAQLGELLREDGPILGVEFDPLPPDAFGAPIAVTEKLKRPSLGFDNKVYERHDVRSNKAMTRAFHEYPFLPNHSSIRSDAYGQLAQSHLHDSMDGPARTPSFVVKNEPVPRIHAAQGHSSRVRLSSLQDKQGLPYPSPTHDDDGPSQRESYANLNIGMNAHFTDHPIVGPENPYAVVGGQIFHSDAILRLDRKRKSDDSRTAREAEAHEMRIQKEIEKQDNIRRKNEERMRKEMERQDRERRKEEERLMRERQREEERTKREQRREIERREKFLKKENLRAEKRRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMELAVASKGLPSIINLDLDTLQNLDTFRDSLCIFPPKRVKLKRPFSIQPWIKSEEHVGNLLMVWRFLITFADVLELWPFTLDEFLQAFHDYDSRLFGEIHVALLKVIIKDIEDVARTPTGLGTNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQLALSAGFGPRLKKRNITWSYATDKDEQGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRNRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAFRKDPADAEAILSDARKKIQIFENGFPTVEDADDVEREEESESDEVDEDPEVDDLVNPLSDNKTSEQYDDMNNCSTNGGENMTHDMELIQNEFGKDIPCVPENCSKDAACPSAVTRQRAVVEDLNTGNPEDNMEIDESKSGESWVLGLTEGEYSDLSVEERLNALVALVGVANEGNSIRLVLEDRLEAANALKKQMWAEAQIDKVRQKDDNSNKSDFPSLTANKVDTQYTGPAVEGNQSPLLDMNINNNEASPSPAENQKEVLGAQNMPIEKPSVGQDLFIGPDNPQILSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGAGRVFIELNDGSWRLIDSEEDFDVLSTSLDSRGIRESHLRLMLQKIENSFKENVRKNAQFKKIATKSIKNEADDVELVPECRAGSDSSSSTLCGLNSDSTSETSSSFKIELGKVESEKKAAVIKYQDIQKWMWKECYNSSTLYSMKYGQRRCKPLLEICDMCLNPYFFEDSHCNSCHHTFATNNGFNFSKHAFQCREKLDTKGVCIWDSSLPLRIRLLKALLACIEASVPLEALQSIWTEENRKQWGVKLSKTSTTDELLQLLTLLERSVQRDFLSSTFSTTEEMLGSSCMPDNAVNASTDTESVPVLPWVPLTAAAVSLRIFEFDASISYVPAEKHEPQFEEKEVREYARLSSRYAPFKSGRAIESAELDHDEFIKEDKSSRSVRSSNKRGRGSHDHGRGKKLSRRTQEPKQHTGRRNVRSAENLGRGLKQQGRGTQGQPGGRGRRTVRKRRVEKRAVEDLLLGHKGVSHSPKISRESLRSLEEEWDGEKEASPVQIDGVDNSNSAEEVESDDNGQAVEYGQGNWEVGFNGGSSNRWDRDLVGVSDEEVVGVSEDDNGIEGEELEEELEEDSEEEVMSEGEDSDGVGNRMMVNEEGSDSAVSEDSSD 1752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1090 1752 MobiDBLite consensus disorder prediction 1520 1752 - -
Prci3g1090 1752 Coils Coil 393 478 - -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 364 435 - -
Prci3g1090 1752 Gene3D - 25 99 - -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 95 117 - -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 1016 1059 - -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 829 872 - -
Prci3g1090 1752 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 15 1752 IPR044977 GO:0006357
Prci3g1090 1752 ProSiteProfiles DDT domain profile. 551 610 IPR018501 -
Prci3g1090 1752 CDD homeodomain 43 97 IPR001356 GO:0003677
Prci3g1090 1752 MobiDBLite consensus disorder prediction 1694 1726 - -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 834 857 - -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 283 321 - -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 1547 1565 - -
Prci3g1090 1752 SUPERFAMILY Homeodomain-like 29 97 IPR009057 -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 1520 1538 - -
Prci3g1090 1752 Pfam HB1, ASXL, restriction endonuclease HTH domain 733 801 IPR007759 GO:0006355
Prci3g1090 1752 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1118 1190 IPR028941 -
Prci3g1090 1752 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Prci3g1090 1752 MobiDBLite consensus disorder prediction 290 304 - -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 1615 1639 - -
Prci3g1090 1752 SMART testlast3 551 610 IPR018501 -
Prci3g1090 1752 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Prci3g1090 1752 MobiDBLite consensus disorder prediction 1007 1059 - -
Prci3g1090 1752 MobiDBLite consensus disorder prediction 1 51 - -
Prci3g1090 1752 SMART HOX_1 40 102 IPR001356 GO:0003677
Prci3g1090 1752 MobiDBLite consensus disorder prediction 1 26 - -
Prci3g1090 1752 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 942 982 IPR028942 -
Prci3g1090 1752 ProSiteProfiles HARE-type HTH domain profile. 733 802 IPR007759 GO:0006355
Prci3g1090 1752 Pfam DDT domain 552 607 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1090 Prci-Chr3 13787457 13797360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1090 4 1675 Homeobox Transcription Factor Family AT1G28420 49.654 0.0 1363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci3g1090 WSD 3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1090 - - gmx:100777465 2185.22