Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1088 ATGGAGGCCGAGGATGCTTCAGACGGGGAGAATAATCGGAAGATGGATACCGGTGATGATTACAATGACAACGATAATGGAAGTAACAAAAAAGCCCTTAATTCTAATGAAGGGCACAGCAAGCCTAAGCGGCAGATGAAGACCCCTTTCCAGCTTGAGTCCCTGGAGAAAGCTTATGCTTTGGAGACGTACCCGTCGGAGGCGATGAGGGCAGAACTGTCGCAGAAGTTGGGGCTGTCGGATCGGCAATTACAGATGTGGTTCTGCCATAGGAGGTTGAAAGACAAGAAGGACGTGCCAAAGCCTTCACGGAAGGCGCCAGCGCCATTGCCCACCTCGCCGACAGACGAGCTGAGAATGGAGACTGAACTCGCCAACGATTATGGATCCGGGTCGGGTTCAGGCTCAAGCCCGTTCACGCGTTCAGAGATGCGGAATGTAGTACCTAGGGGTGTTCCTGGGTACTACGAGTCGCAGCAGGCTCTAATGGAGCATAGAGCAATTTCTTGTGTGGAGGCACAGTTAGGAGAACTCTTAAGGGAGGATGGACCTATTTTAGGAGTTGAGTTTGATCCATTGCCGCCAGATGCATTTGGAGCACCCATAGTCACTGAGAAGCTGAAGCGGCCTAGTCTTGGCTTTGATAATAAAGTCTATGAAAGACATGACGTTAGATCAAATAAGGCTATGACAAGGGCTTTCCATGAATATCCATTTCTCCCAAACCACTCCAGTATTAGATCTGATGCTTATGGACAATTGGCACAATCTCATTTACATGATTCAATGGATGGTCCTGCTAGAACTCCATCTTTTGTCGTAAAAAATGAACCGGTTCCCAGGATTCATGCTGCCCAAGGTCATTCGTCACGTGTTCGTCTTTCATCTCTACAAGATAAGCAAGGGCTTCCCTATCCATCACCCACCCACGATGATGATGGTCCCTCTCAAAGGGAATCTTACGCAAACCTAAATATTGGAATGAACGCTCACTTTACTGATCACCCAATTGTTGGACCAGAAAACCCTTATGCTGTAGTGGGTGGACAAATTTTCCATAGTGATGCAATATTACGGTTGGACAGGAAACGGAAGAGTGATGATTCTAGAACTGCAAGAGAAGCTGAAGCCCATGAGATGAGAATCCAGAAGGAGATAGAGAAACAAGATAACATTAGGCGAAAGAATGAAGAGAGAATGAGGAAAGAGATGGAGAGGCAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAGAGAGAAGAAGAAAGAACAAAACGTGAGCAAAGACGTGAAATCGAACGGAGGGAAAAGTTTCTGAAAAAGGAAAACTTAAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGCTTCGAAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCTCTTGAGAAAGCAGTTGCCCGCAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAACTGGAATTGATGGAGTTGGCTGTGGCTAGCAAGGGACTTCCCTCAATTATAAATCTTGATCTTGACACGTTGCAAAACCTTGATACTTTTCGGGATTCATTATGCATTTTTCCACCTAAAAGAGTCAAGCTGAAAAGACCATTTTCCATCCAACCCTGGATCAAATCCGAGGAGCATGTTGGCAACCTTCTCATGGTTTGGAGATTTCTGATTACATTTGCAGATGTCCTTGAGTTGTGGCCTTTTACTCTTGATGAGTTTTTGCAGGCATTTCATGACTATGATTCAAGATTATTTGGTGAGATACATGTTGCTCTTCTCAAGGTAATAATAAAAGACATCGAAGATGTTGCAAGGACACCTACAGGGTTAGGTACAAACCAGAATGGGGCTGCTAATCCTGGGGGTGGCCATCCAGAGATTGTGGAAGGGGCGTATGCATGGGGCTTTGATATTAGAAATTGGCAGAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGCTAGCACTGTCTGCAGGGTTTGGACCACGGCTGAAGAAAAGAAATATTACATGGTCGTATGCAACTGATAAAGATGAGCAGGGTAGAAGTTGTGAAGACATCATCTCCACACTTCGCAATGGTTCAGCTGCTGAAAATGCAGTGGCAAAAATGCAAGAGAAAGGTCTACTAGCCCCTCGGAGAAATAGGCACCGGTTGACTCCTGGAACAGTTAAGTTTGCAGCATTTCATGTTTTGTCTCTTGAGGGTAGCAAGGGGTTGACGGTACTAGAGCTTGCAGAGAAAATTCAGAAATCTGGACTTCGGGATCTGACAACCAGCAAGACGCCTGAGGCATCAATTTCTGTTGCTTTGACCAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCTTCAACATATCGAGTTCGAGCTGCATTTAGAAAAGATCCTGCTGATGCAGAGGCCATTCTTTCAGATGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCCTACTGTTGAAGATGCTGATGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGATGAAGTTGACGAGGATCCTGAAGTAGATGATTTAGTAAATCCCCTAAGTGATAACAAAACATCTGAACAGTATGATGACATGAATAATTGCTCTACAAATGGGGGAGAAAATATGACCCACGACATGGAACTTATTCAAAATGAGTTTGGCAAGGATATTCCTTGTGTTCCTGAGAATTGTTCCAAGGATGCTGCTTGCCCAAGTGCTGTAACCAGACAACGGGCTGTTGTTGAAGATTTGAATACTGGAAATCCTGAAGATAATATGGAAATTGATGAAAGCAAGTCTGGAGAGTCATGGGTTCTAGGTCTTACAGAAGGGGAATATTCTGACCTTAGTGTAGAAGAACGTCTTAATGCTCTAGTAGCATTAGTTGGTGTTGCAAATGAAGGAAATTCAATACGTCTTGTTCTTGAGGATCGTTTGGAGGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGGCAGAAAGATGATAACTCTAATAAATCAGATTTTCCATCTCTTACTGCAAATAAAGTTGATACACAATATACAGGCCCTGCTGTGGAGGGAAACCAGAGCCCATTGCTCGACATGAATATTAATAATAATGAGGCATCACCCAGCCCTGCAGAAAATCAGAAAGAAGTTCTTGGTGCACAGAACATGCCTATTGAAAAACCTTCAGTTGGTCAAGATCTCTTCATAGGTCCTGACAACCCGCAGATTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCCTATATTGCACATATAGCAGAAGAGATGTATGTATATAGGTCCTTGCCCCTTGGTCAAGATCGGAGACGTAACCGATATTGGCAATTTGTTGCATCTGCTTCCAGCAGTGATCCTGGTGCTGGCAGGGTCTTCATTGAATTAAATGATGGTAGTTGGAGGCTTATTGATTCTGAAGAGGACTTTGATGTACTTTCAACATCCCTCGATTCACGTGGAATTAGGGAATCCCATTTACGCTTAATGTTGCAGAAGATTGAGAATTCCTTCAAGGAAAATGTTCGAAAGAATGCTCAATTTAAGAAAATTGCAACCAAATCAATTAAAAATGAAGCTGATGATGTAGAATTGGTTCCTGAATGCCGTGCTGGATCAGACAGTTCTAGCAGTACTCTTTGTGGTTTGAATTCTGACAGTACATCGGAAACTTCTTCATCATTTAAAATTGAGCTGGGGAAAGTTGAGAGTGAAAAAAAAGCTGCCGTGATCAAGTATCAAGATATTCAAAAGTGGATGTGGAAAGAATGTTATAATTCATCAACATTATATTCAATGAAATATGGGCAAAGGAGATGCAAGCCACTGCTGGAAATATGTGATATGTGTTTGAATCCATATTTCTTTGAAGATTCCCATTGTAATTCTTGCCACCATACTTTTGCTACTAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTAGAGAGAAGTTAGATACCAAGGGTGTATGTATTTGGGATTCTTCTCTTCCCTTGCGGATAAGGTTGCTCAAGGCTCTGTTGGCTTGTATTGAGGCTTCTGTTCCTCTTGAAGCATTACAATCAATTTGGACAGAAGAGAATAGGAAGCAGTGGGGTGTGAAGTTGAGCAAAACATCTACAACTGATGAACTCTTGCAGCTATTGACCTTGTTGGAGAGGTCAGTACAGCGAGACTTTCTGTCATCAACCTTCTCTACAACAGAAGAAATGTTGGGATCAAGCTGCATGCCTGACAATGCTGTAAATGCTTCTACCGATACTGAATCAGTTCCTGTGCTGCCATGGGTACCACTAACTGCTGCAGCCGTGTCATTGAGAATTTTTGAGTTCGATGCATCCATCAGTTACGTACCAGCTGAGAAACATGAGCCGCAGTTTGAGGAGAAAGAAGTGAGGGAATATGCGAGGCTTTCTTCAAGATATGCTCCCTTCAAATCTGGTAGAGCTATTGAATCAGCAGAATTAGACCATGATGAATTCATCAAGGAAGACAAATCTAGTAGAAGTGTTCGAAGCAGCAATAAACGTGGACGAGGGTCTCATGATCATGGACGGGGCAAGAAGTTGTCTAGAAGAACGCAAGAGCCAAAACAGCACACCGGGCGCCGAAATGTTAGAAGTGCTGAGAATTTGGGTCGAGGATTAAAACAGCAGGGGAGAGGGACACAAGGACAACCAGGTGGACGTGGTCGCCGAACAGTCAGGAAAAGAAGAGTGGAAAAAAGGGCTGTTGAGGACTTATTGCTGGGCCACAAGGGCGTCAGTCATAGTCCCAAAATCAGTAGAGAATCATTGAGAAGTTTGGAAGAGGAATGGGATGGAGAGAAGGAGGCAAGTCCCGTCCAAATAGATGGTGTTGATAACAGTAACAGTGCCGAGGAAGTTGAATCTGATGACAATGGGCAAGCAGTGGAGTATGGGCAAGGAAACTGGGAGGTAGGTTTCAATGGTGGCAGCTCCAATAGATGGGATAGAGATTTGGTTGGAGTGAGTGATGAAGAAGTGGTGGGTGTATCTGAAGATGACAATGGCATTGAAGGAGAGGAGTTGGAGGAGGAGTTGGAGGAGGATTCAGAGGAAGAGGTTATGAGTGAGGGGGAGGATTCAGATGGTGTGGGCAATAGAATGATGGTAAATGAAGAGGGCTCAGACTCAGCTGTCTCTGAGGATTCTTCTGATTAG 5256 0.4349 MEAEDASDGENNRKMDTGDDYNDNDNGSNKKALNSNEGHSKPKRQMKTPFQLESLEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKKDVPKPSRKAPAPLPTSPTDELRMETELANDYGSGSGSGSSPFTRSEMRNVVPRGVPGYYESQQALMEHRAISCVEAQLGELLREDGPILGVEFDPLPPDAFGAPIVTEKLKRPSLGFDNKVYERHDVRSNKAMTRAFHEYPFLPNHSSIRSDAYGQLAQSHLHDSMDGPARTPSFVVKNEPVPRIHAAQGHSSRVRLSSLQDKQGLPYPSPTHDDDGPSQRESYANLNIGMNAHFTDHPIVGPENPYAVVGGQIFHSDAILRLDRKRKSDDSRTAREAEAHEMRIQKEIEKQDNIRRKNEERMRKEMERQDRERRKEEERLMRERQREEERTKREQRREIERREKFLKKENLRAEKRRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMELAVASKGLPSIINLDLDTLQNLDTFRDSLCIFPPKRVKLKRPFSIQPWIKSEEHVGNLLMVWRFLITFADVLELWPFTLDEFLQAFHDYDSRLFGEIHVALLKVIIKDIEDVARTPTGLGTNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQLALSAGFGPRLKKRNITWSYATDKDEQGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRNRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAFRKDPADAEAILSDARKKIQIFENGFPTVEDADDVEREEESESDEVDEDPEVDDLVNPLSDNKTSEQYDDMNNCSTNGGENMTHDMELIQNEFGKDIPCVPENCSKDAACPSAVTRQRAVVEDLNTGNPEDNMEIDESKSGESWVLGLTEGEYSDLSVEERLNALVALVGVANEGNSIRLVLEDRLEAANALKKQMWAEAQIDKVRQKDDNSNKSDFPSLTANKVDTQYTGPAVEGNQSPLLDMNINNNEASPSPAENQKEVLGAQNMPIEKPSVGQDLFIGPDNPQILSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGAGRVFIELNDGSWRLIDSEEDFDVLSTSLDSRGIRESHLRLMLQKIENSFKENVRKNAQFKKIATKSIKNEADDVELVPECRAGSDSSSSTLCGLNSDSTSETSSSFKIELGKVESEKKAAVIKYQDIQKWMWKECYNSSTLYSMKYGQRRCKPLLEICDMCLNPYFFEDSHCNSCHHTFATNNGFNFSKHAFQCREKLDTKGVCIWDSSLPLRIRLLKALLACIEASVPLEALQSIWTEENRKQWGVKLSKTSTTDELLQLLTLLERSVQRDFLSSTFSTTEEMLGSSCMPDNAVNASTDTESVPVLPWVPLTAAAVSLRIFEFDASISYVPAEKHEPQFEEKEVREYARLSSRYAPFKSGRAIESAELDHDEFIKEDKSSRSVRSSNKRGRGSHDHGRGKKLSRRTQEPKQHTGRRNVRSAENLGRGLKQQGRGTQGQPGGRGRRTVRKRRVEKRAVEDLLLGHKGVSHSPKISRESLRSLEEEWDGEKEASPVQIDGVDNSNSAEEVESDDNGQAVEYGQGNWEVGFNGGSSNRWDRDLVGVSDEEVVGVSEDDNGIEGEELEEELEEDSEEEVMSEGEDSDGVGNRMMVNEEGSDSAVSEDSSD 1751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1088 1751 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 15 1751 IPR044977 GO:0006357
Prci3g1088 1751 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1117 1189 IPR028941 -
Prci3g1088 1751 Gene3D - 25 99 - -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 289 303 - -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 95 117 - -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 1614 1638 - -
Prci3g1088 1751 CDD homeodomain 43 97 IPR001356 GO:0003677
Prci3g1088 1751 MobiDBLite consensus disorder prediction 1015 1058 - -
Prci3g1088 1751 ProSiteProfiles DDT domain profile. 550 609 IPR018501 -
Prci3g1088 1751 Pfam HB1, ASXL, restriction endonuclease HTH domain 732 800 IPR007759 GO:0006355
Prci3g1088 1751 MobiDBLite consensus disorder prediction 1519 1751 - -
Prci3g1088 1751 SUPERFAMILY Homeodomain-like 29 97 IPR009057 -
Prci3g1088 1751 Pfam DDT domain 551 606 IPR018501 -
Prci3g1088 1751 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Prci3g1088 1751 MobiDBLite consensus disorder prediction 828 871 - -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 833 856 - -
Prci3g1088 1751 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Prci3g1088 1751 Coils Coil 392 477 - -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 1 51 - -
Prci3g1088 1751 SMART HOX_1 40 102 IPR001356 GO:0003677
Prci3g1088 1751 MobiDBLite consensus disorder prediction 1 26 - -
Prci3g1088 1751 ProSiteProfiles HARE-type HTH domain profile. 732 801 IPR007759 GO:0006355
Prci3g1088 1751 MobiDBLite consensus disorder prediction 1546 1564 - -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 1006 1058 - -
Prci3g1088 1751 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 941 981 IPR028942 -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 1519 1537 - -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 1693 1725 - -
Prci3g1088 1751 SMART testlast3 550 609 IPR018501 -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 363 434 - -
Prci3g1088 1751 MobiDBLite consensus disorder prediction 282 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1088 Prci-Chr3 13787457 13797361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1088 4 1674 Homeobox Transcription Factor Family AT1G28420 49.654 0.0 1359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci3g1088 WSD 3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1088 - - gmx:100777465 2179.06