Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1087 ATGGGTGTGGACTATTATAAGATTCTGCAGGTTGACAAGAATGCTACAGATGAAGATTTGAAGAAAGCTTACAGAAAGCTTGCCATGAAATGGCATCCTGATAAGAACCCAAACAATAAGAAAGAGGCTGAAGCCAAATTCAAACAAGTCTCAGAAGCCTATGAGGTTCTAAGTGATCCCCAGAAGAGGACAATTTATGATCAGTATGGAGAAGAAGGGCTCAAAGGTCAGGTGCCACCTCCAGATGCTGGTGGGGCTTCATTCTTCCCAACTGGAAATGGTCCAACGACATTTAGGTTTAACCCCAGAAACGCAGACGACATTTTTGCTGATTTTTTCGGGTTTTCAAGCCCCTTTGGAGGAATGAGGGGTGGCGTCGACGGCATGAGAGGTGGCTCAAGGTCCTTTGGTGGAATTTTTGGAGATGATATATTCAGTTCATTTGGAGAAGACAGGCCAATGAGTCAAGGTCCACGGAAGGCACCTCCTATTGAAAACACGTTGCCTTGCAGCCTCGAGGAGCTCTACAAGGGGACTACCAAGAAGATGAAGATCTCAAGGGAACTCGTAGATGCAAGCGGAAAAACTTTACCAGTGGAGGAAATCTTAACAATTGAAATAAAACCAGGTTGGAAAAAGGGGACAAAGATCACCTTCCCGGAGAAAGGAAACGAACAACCAAATGTTATCCCAGCCGATCTGGTATTCATCATTGATGAGAAAACCCACAGTGTGTTTACAAGGGACGGCAATGATCTGGTAGTGACACAAAAGATATCACTTGCGGAAGCTCTAACAGGCTACACTGTGCATCTCACTACTCTGGATGGTAGGACTCTGAACATTCCCATAAACAACGTAATACATCCAACCTATGAAGAGGTTGTCCCAAAGGAAGGCATGCCAATTCCCAAAGAACCTTCAAGGAGGGGCAGCCTTAGGATTAAGTTCAACATCAAATTCCCGACAAGGTTGACATCGGAGCAGAAAGCTGGAATTAAGAAACTCTTGGGACCATAA 1020 0.448 MGVDYYKILQVDKNATDEDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQVSEAYEVLSDPQKRTIYDQYGEEGLKGQVPPPDAGGASFFPTGNGPTTFRFNPRNADDIFADFFGFSSPFGGMRGGVDGMRGGSRSFGGIFGDDIFSSFGEDRPMSQGPRKAPPIENTLPCSLEELYKGTTKKMKISRELVDASGKTLPVEEILTIEIKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKTHSVFTRDGNDLVVTQKISLAEALTGYTVHLTTLDGRTLNIPINNVIHPTYEEVVPKEGMPIPKEPSRRGSLRIKFNIKFPTRLTSEQKAGIKKLLGP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1087 339 SUPERFAMILY Chaperone J-domain 3 100 IPR036869 -
Prci3g1087 339 MobiDBLite consensus disorder prediction 72 95 - -
Prci3g1087 339 Gene3D - 163 242 - -
Prci3g1087 339 FunFam Dnaj homolog subfamily b member 160 241 - -
Prci3g1087 339 Pfam DnaJ C terminal domain 164 322 IPR002939 -
Prci3g1087 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Prci3g1087 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Prci3g1087 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Prci3g1087 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Prci3g1087 339 CDD DnaJ 4 59 IPR001623 -
Prci3g1087 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Prci3g1087 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 331 IPR008971 GO:0006457|GO:0051082
Prci3g1087 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 158 249 IPR008971 GO:0006457|GO:0051082
Prci3g1087 339 FunFam DnaJ subfamily B member 13 3 123 - -
Prci3g1087 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Prci3g1087 339 Gene3D DnaJ domain 3 123 IPR036869 -
Prci3g1087 339 Gene3D - 243 323 - -
Prci3g1087 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Prci3g1087 339 SMART dnaj_3 3 62 IPR001623 -
Prci3g1087 339 FunFam DnaJ subfamily B member 13 243 323 - -
Prci3g1087 339 CDD DnaJ_C 162 325 - -
Prci3g1087 339 Pfam DnaJ domain 4 67 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1087 Prci-Chr3 13781890 13784521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1087 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.22e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1087 K09510 - qsa:O6P43_031876 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1087 3 13781890 13784521 Prci3g1087 3 13781890 13784521 ECH