Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1048 ATGTCACTCTCAGAATCTCCGGTTGCTGCCGATGAGGACAGCGACCCATCGATTGACATGGAAGTAGAGGAAGATCCTGGGGAAGAAGAATATGAAGAAGAGGAAGATCCCGAAGAGGAAGAATATGAAGAGGTGGAAGTAGAGGAAGAAGTAGAGGAAGAGGAAGAAGAGGAGAAGGGGGAGGAAGATGAAGAAGAGGAGGAGGGAGAGGAAGAGGGAGAGGAAGAGGAAGAAGAGGAGGAGGGGCAGGAGGAGGTGGAGCAGGAGGAGGAGGAGGTGGAGGTGGAGGAAGAGGTGGAGGAGGAGGAGGTGGAGATGGAGGAAGTGGAGGTGGAGGTGAAGGACAATTTTAAGGTGTCGGAACTTCCAGCAGATGCTGCTAAGGACCCAGAAGATTTGAGCCAACATATGGAGTCTGAGGGGCAAGAGAGGAACTTGAGGCTAGTTTCTTCTGTAGCAGCAAAACTTGATACAGTTTCTGCAGAAAATAATGACTCATGTAAGGCTCTTTCGATGCAAAAGGAAGATTTTCAGCTGGAACATGTGACTCCAAGTAGTCCAAATTCAAGAAATAATGTGGTTACTGCTGAAGATGATAGACATCAAGGGATAGATGTTGATAATAAAAGTAATGGATCCCCTCTACAATGTAAAACCTTTGGAGCATACAATGAACTGAGTTGTGATGGCAAAGCTTACTTATGCGGTGTTAAAGAGTCTGGGACAGTCAAGTCATCTAGTGATGCCGTAAAAGACGTGGCTGTTGACATCCATCAGAGAGGCTGCTCTCTTGAGGATGCTTATGTTGGCACTCAGAATTCTATAAACCAAGTAAAGCAGTTGGACATGCATTCAGGGGATGAAATGAAGCAAATGACATCAAGATTTACTTCCGCTGATATGAGGACTCAAAGTCTTTCTCCCAGTGCTGAGATGAAAGATGGAAACAAACGACCAGCAATTTTATGCAGCTTTTTTGCTAAAGGATGGTGTATCAGAGGTAGTTCATGTAGGTTTCTTCATATAAAAGATCATGCAAGTAATACTGGCCAGCAGGCTGAAGGAGACTTGGTTTCTACAAATTGCAAGAGAGGACAGTTGGACGGAGGTCTGAGAGGTAATGCTGAGACATCAGGAATGCCTAATGCTCCAGTGCCATTGGCTGCTTCATTAGTGAGCTCTTCTTTGCATTCTTCTGAATTTTCTGTAAAAGAGACCATCCAGAATGAACAAGAAGCAAGCCTGAGTCAGCATCCATCCCAAGATAAACAGAAGTTCCCATTACTTCCGAAACAAGATTTACATTCTAAGAACCATGTCTTACCAATTGGTAGAGATAGTTCTACATCACGGGACTGCTTGATTCCTGAAAATAGATCTATATTTAATGCATCAAACGACTATTGCAGTAGGAATCTCTCTTCTTATCCATCCTGTCCGGAGCAATTGGCTCCCATTCAAAACCAACAGGTGTATAACAAATATTCTTCCCAAGTTTCAGCCCCATCAGGTTACCTGATGTCTTCAAATTTATCTACTGGGGCAAGTACTTTGGATGCTCAAAAGCCGTTGAAAAGTGGCAAAGAATATCATGCCCCCAGATCCACTTTCTTGGGTTCAGAATGGGAAGAGTTGCCTCTAACTAGTTCATCTGGAGTTCGGCCACATGCTGCTGGATCTAAAAGAAAAATACCTTCTTATGATTGGGAGCCATCTGTACCTTTTCGACCATCATTTTTTATTACTTCAGCCAGTATATCATCTTCTGGAGATATGTATGACCCATTTCATCCTTGTGTTGAGATAACCAATATAGGAGATGGGTCCCTAAAAGCTTCCTTTTTCATTCACGGGCCTCCCATTCAGGCTTCGTCTCTGGTTCGGGCATATGGTGATTGTGCTGTAGCTGGGGACAAGGTGGCAGATCTTGATGATGACAAGAGTTCTGTATCTTCTCATCACAGATTTTGTGAGGATGAGGCAATGAAGAATTCTTTTCCTTCGGAAAAAGATGGCCGTGCACATGAAACAGACACAACAGCAAGAACCTATCTAAACTCCCACAATGGTAAGGCAAGCATTGGGGAAAACACCCTTGCTGTTGAAGATAATGCAAAAGTTGAAGTTGAACAAACAGAGCATGATGCCAAATATCGAGGTGAAGGATTGGGAACCAAAAAGAGAAGAGTAGATAAGGCTAAGAGAAGCCATGAAATTAATGTTGACTTTCATATGGATGGCAATATGCGGAATGATTTGAAGGCTCTAAAAAGTTTTCGTGCAGCTCTTGTAGATTTAGCGAAAGAGTTGTTAAAACCATCTTGGCAAGAGGGTCGTCTCAGCAAGGATGCACATAATACAATAGTTAAGAAATCAGTTGATAAGGTTATTAGCACCCTACAACCCCACCAGATTCCAACCACCATAGATGCAGTTAACCACTTTGTTTCTTCATCTCGGTTGAAAATTGCAAAGCTCGTTGATGGATATGTCAATAAATACAGCAAGTGTTGA 2514 0.4304 MSLSESPVAADEDSDPSIDMEVEEDPGEEEYEEEEDPEEEEYEEVEVEEEVEEEEEEEKGEEDEEEEEGEEEGEEEEEEEEGQEEVEQEEEEVEVEEEVEEEEVEMEEVEVEVKDNFKVSELPADAAKDPEDLSQHMESEGQERNLRLVSSVAAKLDTVSAENNDSCKALSMQKEDFQLEHVTPSSPNSRNNVVTAEDDRHQGIDVDNKSNGSPLQCKTFGAYNELSCDGKAYLCGVKESGTVKSSSDAVKDVAVDIHQRGCSLEDAYVGTQNSINQVKQLDMHSGDEMKQMTSRFTSADMRTQSLSPSAEMKDGNKRPAILCSFFAKGWCIRGSSCRFLHIKDHASNTGQQAEGDLVSTNCKRGQLDGGLRGNAETSGMPNAPVPLAASLVSSSLHSSEFSVKETIQNEQEASLSQHPSQDKQKFPLLPKQDLHSKNHVLPIGRDSSTSRDCLIPENRSIFNASNDYCSRNLSSYPSCPEQLAPIQNQQVYNKYSSQVSAPSGYLMSSNLSTGASTLDAQKPLKSGKEYHAPRSTFLGSEWEELPLTSSSGVRPHAAGSKRKIPSYDWEPSVPFRPSFFITSASISSSGDMYDPFHPCVEITNIGDGSLKASFFIHGPPIQASSLVRAYGDCAVAGDKVADLDDDKSSVSSHHRFCEDEAMKNSFPSEKDGRAHETDTTARTYLNSHNGKASIGENTLAVEDNAKVEVEQTEHDAKYRGEGLGTKKRRVDKAKRSHEINVDFHMDGNMRNDLKALKSFRAALVDLAKELLKPSWQEGRLSKDAHNTIVKKSVDKVISTLQPHQIPTTIDAVNHFVSSSRLKIAKLVDGYVNKYSKC 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1048 837 MobiDBLite consensus disorder prediction 111 143 - -
Prci3g1048 837 Gene3D - 313 377 - -
Prci3g1048 837 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 30 836 - -
Prci3g1048 837 Pfam Torus domain 284 342 IPR032297 -
Prci3g1048 837 MobiDBLite consensus disorder prediction 12 110 - -
Prci3g1048 837 MobiDBLite consensus disorder prediction 1 144 - -
Prci3g1048 837 ProSiteProfiles Zinc finger C3H1-type profile. 317 344 IPR000571 GO:0046872
Prci3g1048 837 SMART c3hfinal6 317 343 IPR000571 GO:0046872
Prci3g1048 837 SUPERFAMILY CCCH zinc finger 317 341 IPR036855 GO:0046872
Prci3g1048 837 MobiDBLite consensus disorder prediction 402 423 - -
Prci3g1048 837 MobiDBLite consensus disorder prediction 402 432 - -
Prci3g1048 837 Coils Coil 28 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1048 Prci-Chr3 13482872 13496794 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci3g1048 Torus 8.2e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1048 - - pcin:129306230 1441.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1048 3 13482872 13496794 Prci3g1048 3 13482872 13496794 ECH