Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1045 ATGCCAGCACAGAAGCGCTTGTTCGACGCACAAGAAGAGGATGCTTTACACGGCGAGAGGAATCGCCATGAGAAGCCAGAAGATGGATTGGAATCTGATCGAAGCCCTTCGGAGAGCACTGGCGACAAAGAAGAGTTTGTTGTTATAAAATTGTCAGATGTACGCAAGGAAGTTCAGTGCCCTATCTGCCTAGGCATTATTCGAAAAACAAGAACCGTAATGGAATGCCTGCACCGCTTTTGCAGAGAGTGTATAGACAAATCCATGCGCCTCGGCAACAATGAATGCCCTGCCTGCCGCACACATTGTGCTAGCCGACGCTCACTGAGAGATGACCCAAACTATGATGCCTTAATTGCTGCACTCTATCCAGACATAGACAAGTACGAGCAGGAGGAATTGGCTCTGCATGACGATGAAAAAGCTCGCAATAAGCAGATCCAAGAATCTATTGCTCAGACTCTTCAACGACAAACAGAAGCGCTGGGTAAGAAACGCAATGCCAAAGCGATTACAAGGAGGTCACAAGGTAACTATAGAACTTTGCAATTGAGGGTAAGAAGAAATTGTAGAAGTACGATTGAACTTCAGGGATCTGATGACACTGAGGACATGAATGATGATGATGGGGCCAAGGGTTCTTCTTCTGGTGATGAGTTGATAGAAATCAAGTCAAAAAGATGTAAAAAAGGGGCGGAAGCACAATTTCCTCTGCACTCTGCAACCACTGTTGCAGATGGTGCCGGTGATGAAAATGTTCCTGAAGTGAGTAGAGAATTCTTGAGTCCTTCTAGTACATTTGCCTGGGGAAAAAATGGCCACCGGAGTCACACCCGAGTCAATGGCAAGAATGCCAGAAATAGTCGCCTTGCCAAATTGATTGATAATCTCCGTAGCTTAGAAGAAAATGATGATGAGTTGGGTGTCTCCCTCATGCTTGTGCCTTTTGATGAGAAAAGAATACCAAGTTTGCAGCAGCCATACCTCTACTGCAGACCTACATTGTCTGTCAGGCACCTGTGCCAGTATGTTGCCCTTCAAACAGCTGTACAGGCTGATGAGGTTGAGATATGCTTGGTAAAAGAGCAGCAAGCCAACTTTATTAGAGCTGCAGGCTCAGTAGATATACCCAAAGATAATTTGCAACTGTTGAGAGAGCAGGAAACTTTGGCCGAACTTAAACCTGATAATTTTAGCTTTGGCCATCTGCTTATGGCATATAAGAGGAGGCTGTTGAATTCAACTGCGGCTGACTTGAGGTGA 1263 0.4545 MPAQKRLFDAQEEDALHGERNRHEKPEDGLESDRSPSESTGDKEEFVVIKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEQEELALHDDEKARNKQIQESIAQTLQRQTEALGKKRNAKAITRRSQGNYRTLQLRVRRNCRSTIELQGSDDTEDMNDDDGAKGSSSGDELIEIKSKRCKKGAEAQFPLHSATTVADGAGDENVPEVSREFLSPSSTFAWGKNGHRSHTRVNGKNARNSRLAKLIDNLRSLEENDDELGVSLMLVPFDEKRIPSLQQPYLYCRPTLSVRHLCQYVALQTAVQADEVEICLVKEQQANFIRAAGSVDIPKDNLQLLREQETLAELKPDNFSFGHLLMAYKRRLLNSTAADLR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1045 420 PANTHER OS11G0578200 PROTEIN 12 410 IPR044592 -
Prci3g1045 420 MobiDBLite consensus disorder prediction 7 43 - -
Prci3g1045 420 ProSitePatterns Zinc finger RING-type signature. 76 85 IPR017907 -
Prci3g1045 420 ProSiteProfiles Zinc finger RING-type profile. 60 100 IPR001841 -
Prci3g1045 420 MobiDBLite consensus disorder prediction 1 43 - -
Prci3g1045 420 CDD RING-HC_RING1-like 57 122 - -
Prci3g1045 420 Pfam Zinc finger, C3HC4 type (RING finger) 59 99 - -
Prci3g1045 420 Coils Coil 283 303 - -
Prci3g1045 420 SUPERFAMILY RING/U-box 47 131 - -
Prci3g1045 420 SMART ring_2 60 99 IPR001841 -
Prci3g1045 420 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 130 IPR013083 -
Prci3g1045 420 MobiDBLite consensus disorder prediction 193 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1045 Prci-Chr3 13464675 13469459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1045 53 123 C3H Transcription Factor Family AT3G23060 33.784 1.53e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1045 K10695 - qsa:O6P43_031861 519.62