Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1043 ATGGAAAGAAGCGGCGGAGAGGGAAAAAGGAGCTTCAAGTACAAAGTCGAGGAGGAGGAGGAGGAGGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGTTGATGAGTTTGATGATGGGAGGAAGAAGATGAGAGATCCGTACAGCAAGAGAGGGTCGTCATCATCAATGGCACCTTCCTGTCAGGTGGAAAGTTGTGACAGTGATCTGAGCGAGGCTAAGAACTACCATCGCCGCCACAAGGTCTGTGAATTCCATGCCAAGGCTCCTTCTGTGCTCATTGCAGGCGTGCACCAAAGGTTTTGCCAGCAATGCAGCAGGTTTCATGAGCTGGGAGAATTTGATGACACGAAGAGGAGTTGTAGAAAGCGTTTGGCTGGACACAATGAAAGGCGTCGAAAAAATTCTTCTTAA 414 0.4807 MERSGGEGKRSFKYKVEEEEEEVEEEEEEEEEEVDEFDDGRKKMRDPYSKRGSSSSMAPSCQVESCDSDLSEAKNYHRRHKVCEFHAKAPSVLIAGVHQRFCQQCSRFHELGEFDDTKRSCRKRLAGHNERRRKNSS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1043 137 SUPERFAMILY SBT domain 59 136 IPR036893 GO:0003677|GO:0005634
Prci3g1043 137 MobiDBLite consensus disorder prediction 1 17 - -
Prci3g1043 137 MobiDBLite consensus disorder prediction 1 64 - -
Prci3g1043 137 ProSiteProfiles Zinc finger SBP-type profile. 58 135 IPR004333 GO:0003677
Prci3g1043 137 MobiDBLite consensus disorder prediction 50 64 - -
Prci3g1043 137 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 46 136 IPR044817 GO:0003677
Prci3g1043 137 Coils Coil 9 40 - -
Prci3g1043 137 PIRSF SBP 5 137 IPR017238 GO:0003677|GO:0003700|GO:0009908
Prci3g1043 137 Pfam SBP domain 61 134 IPR004333 GO:0003677
Prci3g1043 137 FunFam Squamosa promoter-binding-like protein 14 52 122 - -
Prci3g1043 137 MobiDBLite consensus disorder prediction 18 36 - -
Prci3g1043 137 Gene3D - 52 122 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1043 Prci-Chr3 13435929 13437736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1043 1 137 SBP-box Gene Family AT2G33810 58.394 6.49e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci3g1043 SBP 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1043 - - gmx:100817597 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1043 3 13435929 13437736 Prci3g1043 3 13435929 13437736 ECH
Prci7g1870 7 33363810 33367342 Prci3g1043 3 13435929 13437736 ECH