Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1020 ATGATAGGCAAGATTCAAGCTGCTTCGTCCAGAGGCGATAGGAAAATTATCGAGAGGGACCGAAGAACCCAAATGAGGGCTCTCTACTCCAAGCTCAACTCGCTCCTCCCTCATCAATCCTCCACGGAGCTGGTTTCGCAGTCGGATCAACTAGAAGAGGCTGCGAACTACATAAAGAAGATTCAGATAAAGTTGGAGAAGCTGAATGAGAAAAAACTTAGCCTTATGGGAATCGAAAATGAACTGTCAAATACTTGCAACAGAGGAACGATCATTTTGGAGTCCAAATCACCCAAAGTTGAGATTCACCAAATGGGTTCAGCATTGGAGGTTTCTGTGATTACTGGGTTGGATTGCCAGTTCATTTTCAACGAGTTCATTAGCATTCTTCACGAAGAAGAAGCCGATGTTGTTCATGCCAGTTATTCAGTCGTTCATGATGCTGTTTTTCATACCATACACAGTCAGATAGGAGATGGTGGTAACAGAGCTGGGAGGATATCGGAGAGATTAAAGAGGTTTGCGTATGGTTCTGGTGCATTTTGA 546 0.4377 MIGKIQAASSRGDRKIIERDRRTQMRALYSKLNSLLPHQSSTELVSQSDQLEEAANYIKKIQIKLEKLNEKKLSLMGIENELSNTCNRGTIILESKSPKVEIHQMGSALEVSVITGLDCQFIFNEFISILHEEEADVVHASYSVVHDAVFHTIHSQIGDGGNRAGRISERLKRFAYGSGAF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1020 181 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 75 IPR036638 GO:0046983
Prci3g1020 181 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 174 - -
Prci3g1020 181 Gene3D - 5 89 IPR036638 GO:0046983
Prci3g1020 181 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Prci3g1020 181 SMART finulus 15 67 IPR011598 GO:0046983
Prci3g1020 181 Coils Coil 51 71 - -
Prci3g1020 181 Pfam Helix-loop-helix DNA-binding domain 11 62 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1020 Prci-Chr3 13073273 13074384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1020 13 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 43.353 4.96e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci3g1020 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1020 - - pcin:129305410 293.123