Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1019 ATGGAGAGCGTTCCAGGTGCTTCGTCCAGAGGCGATAGGAAAGTTATAGAGAGGAACCGAAGAAGCCAAATGAGGGCTCTTTACGCCAAGCTCAACTCGCTGCTTCCTCATCAATCCTCCAGGGAATCGATTTCGCTGCCGGATCAGCTGGATGAAGCCACGACCTACATAAAGAAGCTTCAGATAAGGTTGGAGGAGTTGAAGGAGAAGAAACTCAACCTTGTGGGCACCGACAATAAGAGAAATGCTCATGGGAGCCAAATTCACAATGGAGGAATGATTTTGGGGTCGAAATCACCTAAAGTTGAGACTCACCAAATGGGTTCGGCATTAGAGGTTTCTGTGATTACTGGGTTGGATTGCCAGTTCATCTTCAACGAGTTCATTCGCATTCTTCACGAAGAAGAAGCCGAAGTTGTTAACGCCAGTTATTCAGTCGTTCATGATGCTGTTTTTCATATCATACACTGTCAGATAGGAGAATATGGTAACAGAGCTGAGAGGATATCGGAGAGATTAAAGAGGTTCGTGTACGGTTCTGGCACATTTTGA 552 0.4565 MESVPGASSRGDRKVIERNRRSQMRALYAKLNSLLPHQSSRESISLPDQLDEATTYIKKLQIRLEELKEKKLNLVGTDNKRNAHGSQIHNGGMILGSKSPKVETHQMGSALEVSVITGLDCQFIFNEFIRILHEEEAEVVNASYSVVHDAVFHIIHCQIGEYGNRAERISERLKRFVYGSGTF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1019 183 Gene3D - 6 90 IPR036638 GO:0046983
Prci3g1019 183 SMART finulus 14 66 IPR011598 GO:0046983
Prci3g1019 183 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 8 60 IPR011598 GO:0046983
Prci3g1019 183 Coils Coil 50 77 - -
Prci3g1019 183 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 73 IPR036638 GO:0046983
Prci3g1019 183 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 178 - -
Prci3g1019 183 Pfam Helix-loop-helix DNA-binding domain 10 61 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1019 Prci-Chr3 13056954 13058056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1019 6 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 47.486 2.16e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci3g1019 HLH 7.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1019 - - pcin:129305410 214.542