Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1017 ATGATAGGCGAGATTCAAGCTGCTTCGTCCAGAGGCGATAGGAAAGTCATCGAGAGGGACCGAAGAACCCAAATGAGGGCTCTCTACTCCAAGCTCAACTCGCTCCTCCCTCATCAATCCTCCCCGGAGCTGGTTTCGCAGTCGGATCAACTAGAAGAGGCCTCGAACTACATCAAGAAGATTCAGATGAAGTTGGAGAAGCTGAATGAGAAAAAACTTAGCCTTATAGGAATCAATAATGAACTGTCAAATACTTGCAACAGAGGAACGATCATTTTGGAGTCCAAATCACCCAAAGTTGAGATTCACCAAATGGGTTCAGCATTGGAGGTTTCTGTGATTACTGGGTTGGATTGCCAGTTCATTTTCAACGATTTCATTAGCATTCTTGACGAAGAAGCCGATGTTGTTCATGCCAGTTATTCAGTCGTTCATGATGCTATAGGAGATGGTGGTAACAGAGCTGGGAGGATATCGGAGAGATTAAAGAGGTTTGTGTATGGTTCTGGTGCATTTTGA 519 0.4451 MIGEIQAASSRGDRKVIERDRRTQMRALYSKLNSLLPHQSSPELVSQSDQLEEASNYIKKIQMKLEKLNEKKLSLIGINNELSNTCNRGTIILESKSPKVEIHQMGSALEVSVITGLDCQFIFNDFISILDEEADVVHASYSVVHDAIGDGGNRAGRISERLKRFVYGSGAF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1017 172 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 75 IPR036638 GO:0046983
Prci3g1017 172 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Prci3g1017 172 Pfam Helix-loop-helix DNA-binding domain 11 62 IPR011598 GO:0046983
Prci3g1017 172 Coils Coil 51 71 - -
Prci3g1017 172 Gene3D - 5 89 IPR036638 GO:0046983
Prci3g1017 172 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1017 Prci-Chr3 13031930 13032808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1017 13 166 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.306 1.42e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci3g1017 HLH 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1017 - - pcin:129305410 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g1017 3 13031930 13032808 Prci3g1017 3 13031930 13032808 CCT