Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g1016 ATGGAGAGCATTCCAGCTTCTTCATCCGGAGGCGACAGAAAAGCCATAGAGAGGAACAGAAGAAGCCAAATGAGAACTCTTTGCTCCCAACTCAGCTCTCTCGTCCCTCGTCAATCCCCTGGGGAGGTGATTTCGGTGTCGGATCAGCTGGGTGAAGCCGTGACCTACATAAAGAAGCTTCAGATGAAGTTGGAGAAGATGAAGGAGAAGAAGCTCAGCCTCATGGGAATCAGTGACGAGGAGACGAATGTTGATGAGAGACAGAAGAAAAAGAGAGGAATTGTTATGGGGTCGAAATCACCCCAAGTTGAGATTCACCAAATGGGTTCCACATTAGAGGTTTCTGTGATTTCTGGGTTGGATTGCCAGTTCATTTTCAACGAGTTCATTCGCATTCTTCACGAAGAAGAAGCCGATGTTGTTAACGCCAGTTATTCAGTCGTTCAAGATACTGTTTTTCATGCCATCCACTGTCAGATCGGAGAATGTGATGACAGCAGATCAGGGAGGATATCGGAGAGATTAAAGAGGTTTGTGTATGGTTCTGGTTCTGGTGCGTTTTGA 564 0.4628 MESIPASSSGGDRKAIERNRRSQMRTLCSQLSSLVPRQSPGEVISVSDQLGEAVTYIKKLQMKLEKMKEKKLSLMGISDEETNVDERQKKKRGIVMGSKSPQVEIHQMGSTLEVSVISGLDCQFIFNEFIRILHEEEADVVNASYSVVQDTVFHAIHCQIGECDDSRSGRISERLKRFVYGSGSGAF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g1016 187 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 180 - -
Prci3g1016 187 SMART finulus 14 66 IPR011598 GO:0046983
Prci3g1016 187 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 8 60 IPR011598 GO:0046983
Prci3g1016 187 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 74 IPR036638 GO:0046983
Prci3g1016 187 Gene3D - 11 92 IPR036638 GO:0046983
Prci3g1016 187 Pfam Helix-loop-helix DNA-binding domain 13 61 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g1016 Prci-Chr3 13018276 13019585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g1016 5 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 38.043 5.08e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci3g1016 HLH 9.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g1016 - - pcin:129305410 187.963