Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0957 ATGAGTTGTGGCTGCTTTGGAGCCTCAACTATAAAGAGGAAAAGTAGTCCTGCTCGTAATCCTAATGAGGATGATGGCATTGCAATTGATAATGTTAGGAATTTCTCCGATAAAGAACTAAGGTTGGCAACAGATAATTATGACCCAAGGAACAAGATAGGAAGGGGAGGTTTTGGAACTGTTTACCAGGGGACCTTGAGAGATGGAAGAAAAGTAGCAGTGAAGACCCTTTCAGCAGGATCAAGGCAAGGAGTTCGTGAATTTTTAGCTGAAATCAAGACTATATCAAATGTTAAGCATCCAAACCTTGTTGAATTGATTGGCTGCTGTGTTCAAGGACCTAGTCGTATTTTGGTATATGAGTATGTGGAAAATAACAGCCTTGATCGTGCATTACTTGGCACGAGGAATACAGGCATCAAACTAGACTGGAGAAGAAGATCTGCAATTTGTATGGGTACTGCTAGGGGTCTTGCATTCCTTCATGAAGAACTTGTTCCACACATTGTGCACAGAGACATTAAAGCTAGCAACATACTACTTGACAAAGACTTTAATCCGAAAATAGGAGATTTTGGGTTGGCTAAATTATTCCCGGATGACATCACTCACATTAGCACTAGAATTGCTGGAACAACCGGTTATCTAGCCCCAGAATATGCATTAGGCGGTCAGTTAACCTTGAAGGCTGATGTATACAGCTTTGGAGTTCTTGTACTAGAAATAATAAGTGGCAAAAGTAGTTCAAGGGAAACTTGGGGAGGAACTGAGAAAGTCCTCTTGGAATGGGCTTGGCAACTTCACGAAGAAGGAAGACTTCTGGAGCTAGTGGATCCTGAGATTGGAGAATTTCCTGAGGAAGAAGTGATTAGGTACATGAAGGTAGCTTTTTTCTGCTCACAGGCGGCAGCAAACAGAAGGCCATTAATGTCCCAAGTTGTGGATATGCTGTCCAGGAAAATCCGGCTCAATGAGAAGGAGCTAACGGCACCAGGATTCTACCAGAATTCAGGAGAATCCTCTAAAAAGAACCTATTCAGTGAGTCTACTAGCAATCAAACTCATTCTCTTCCTCCCACTATTACTCAGGAGGGAAATGTCAAGTAG 1107 0.4228 MSCGCFGASTIKRKSSPARNPNEDDGIAIDNVRNFSDKELRLATDNYDPRNKIGRGGFGTVYQGTLRDGRKVAVKTLSAGSRQGVREFLAEIKTISNVKHPNLVELIGCCVQGPSRILVYEYVENNSLDRALLGTRNTGIKLDWRRRSAICMGTARGLAFLHEELVPHIVHRDIKASNILLDKDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTLKADVYSFGVLVLEIISGKSSSRETWGGTEKVLLEWAWQLHEEGRLLELVDPEIGEFPEEEVIRYMKVAFFCSQAAANRRPLMSQVVDMLSRKIRLNEKELTAPGFYQNSGESSKKNLFSESTSNQTHSLPPTITQEGNVK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0957 368 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Prci3g0957 368 SUPERFAMILY Protein kinase-like (PK-like) 31 343 IPR011009 -
Prci3g0957 368 CDD STKc_IRAK 53 319 - -
Prci3g0957 368 MobiDBLite consensus disorder prediction 332 368 - -
Prci3g0957 368 SMART serkin_6 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0957 368 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0957 368 FunFam cold-responsive protein kinase 1 18 122 - -
Prci3g0957 368 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 350 - -
Prci3g0957 368 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
Prci3g0957 368 Pfam Protein tyrosine and serine/threonine kinase 51 316 IPR001245 GO:0004672|GO:0006468
Prci3g0957 368 MobiDBLite consensus disorder prediction 1 27 - -
Prci3g0957 368 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Prci3g0957 368 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 329 - -
Prci3g0957 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0957 Prci-Chr3 12413616 12420503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0957 19 359 Receptor kinase-like Gene Family AT1G56120 50.716 2.04e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci3g0957 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0957 - - gmx:100788143 604.749