Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0929 ATGGATAGCACCGATTCATCCTCAGGGTGTCTTCATCCTCAGCTTCCTCCTGGTTTCCGATTCCATCCCACCGACGAAGAGCTCGTCGTTCACTACCTGAAGAGGAAAGCCGCCTCTGCTCCGCTTCCCGTCTCCATCATCGCCGACGTCGATCTGTACAAGTTCGACCCCTGGGAGCTTCCAAGTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCGAGAGATCGGAAGTATCCGAATGGAGCAAGGCCAAACAGGGCAGCTACTTCAGGATATTGGAAAGCTACCGGAACGGACAAGCCTATATTGTCGTCGGACGGACGAAACCAGAAGGTCGGCGTGAAGAAAGCTCTGGTTTTCTACGGCGGCAAGCCTCCAAAAGGCGTTAAAACCAATTGGATCATGCACGAGTATAGGCTCACTGATAGCAATTCTTACAATAATAATTCTATCCCTAAGCTTCCTCCAATGGCTTCCGATAGTCCTCCGTCTCAATCTAACAAGAAAAACTCCTTAAGGCTTGACAATTGGGTTTTGTGTCGAATATACAAGAAAAGCAACAGTAATGTGAACACCACTCTGCAGAGGCCGCCATTGATGGAGCAGGAGAGGGAGATTTCTATGGAGGCTATGCTTCCCACCATCTCGACTTTATCAATGGCTAATACTGGTAACGCCAATCCTTCATTAGGACTTGAGAATGATGACAACTTCTTCGATGGAATTCTCGGCGGCGGCGATTCTAATGATCATCACTTGCTGTCTTCAAACTCATCAAGATCTAGCAGTTTCCTTCCAGTGAAACGACCCCTTCCGTCGCCGTTTGGGTCTCCGTCAGGGTCTTCTTCGTCGAACAAGAGATTCCACGGTGATCTTAACGGCACCGGTGGGATCAGTAATACTTCAGCAGATGAGAACAGCTCCTTCATTTCTCTGCTGAGCCAGCTTCCTCCTCCTCATCAGAGTAGGACGACGTTTCACCACCCTAATGCCCTTCTCGGCGATGGTGTCTTGAGACAGCAGTTTCAACTTCCGAGCCTGAATTGGACCTCATAG 1065 0.4958 MDSTDSSSGCLHPQLPPGFRFHPTDEELVVHYLKRKAASAPLPVSIIADVDLYKFDPWELPSKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGRNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDSNSYNNNSIPKLPPMASDSPPSQSNKKNSLRLDNWVLCRIYKKSNSNVNTTLQRPPLMEQEREISMEAMLPTISTLSMANTGNANPSLGLENDDNFFDGILGGGDSNDHHLLSSNSSRSSSFLPVKRPLPSPFGSPSGSSSSNKRFHGDLNGTGGISNTSADENSSFISLLSQLPPPHQSRTTFHHPNALLGDGVLRQQFQLPSLNWTS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0929 354 ProSiteProfiles NAC domain profile. 15 188 IPR003441 GO:0003677|GO:0006355
Prci3g0929 354 SUPERFAMILY NAC domain 11 188 IPR036093 GO:0003677|GO:0006355
Prci3g0929 354 MobiDBLite consensus disorder prediction 256 304 - -
Prci3g0929 354 Gene3D NAC domain 24 193 IPR036093 GO:0003677|GO:0006355
Prci3g0929 354 MobiDBLite consensus disorder prediction 278 304 - -
Prci3g0929 354 MobiDBLite consensus disorder prediction 148 173 - -
Prci3g0929 354 FunFam NAC transcription factor 56 24 193 - -
Prci3g0929 354 PANTHER NAC TRANSCRIPTION FACTOR 56 15 230 - -
Prci3g0929 354 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0929 Prci-Chr3 11953193 11954747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0929 5 354 NAC Transcription Factor Family AT1G61110 53.521 5.67e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci3g0929 NAM 4.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0929 - - qsa:O6P43_031801 441.81