Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0928 ATGGATAGCACCGATTCATCCTCAGGGTGTCTTCATCCTCAGCTTCCTCCTGGTTTCCGATTCCATCCCACCGACGAAGAGCTCGTCGTTCACTACCTGAAGAGGAAAGCCGCCTCTGCTCCGCTTCCCGTCTCCATCATCGCCGACGTCGATCTGTACAAGTTCGACCCCTGGGAGCTTCCAAGTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCGAGAGATCGGAAGTATCCGAATGGAGCAAGGCCAAACAGGGCAGCTACTTCAGGATATTGGAAAGCTACCGGAACGGACAAGCCTATATTGTCGTCGGACGGACGAAACCAGAAGGTCGGCGTGAAGAAAGCTCTGGTTTTCTACGGCGGCAAGCCTCCAAAAGGCGTTAAAACCAATTGGATCATGCACGAGTATAGGCTCACTGATAGCAATTCTTACAATAATAATTCTATCCCTAAGCTTCCTCCAATGGCTTCCGATAGTCCTCCGTCTCAATCTAACAAGAAAAACTCCTTAAGGAGGCCGCCATTGATGGAGCAGGAGAGGGAGATTTCTATGGAGGCTATGCTTCCCACCATCTCGACTTTATCAATGGCTAATACTGGTAACGCCAATCCTTCATTAGGACTTGAGAATGATGACAACTTCTTCGATGGAATTCTCGGCGGCGGCGATTCTAATGATCATCACTTGCTGTCTTCAAACTCATCAAGATCTAGCAGTTTCCTTCCAGTGAAACGACCCCTTCCGTCGCCGTTTGGGTCTCCGTCAGGGTCTTCTTCGTCGAACAAGAGATTCCACGGTGATCTTAACGGCACCGGTGGGATCAGTAATACTTCAGCAGATGAGAACAGCTCCTTCATTTCTCTGCTGAGCCAGCTTCCTCCTCCTCATCAGAGTAGGACGACGTTTCACCACCCTAATGCCCTTCTCGGCGATGGTGTCTTGAGACAGCAGTTTCAACTTCCGAGCCTGAATTGGACCTCATAG 999 0.5025 MDSTDSSSGCLHPQLPPGFRFHPTDEELVVHYLKRKAASAPLPVSIIADVDLYKFDPWELPSKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGRNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDSNSYNNNSIPKLPPMASDSPPSQSNKKNSLRRPPLMEQEREISMEAMLPTISTLSMANTGNANPSLGLENDDNFFDGILGGGDSNDHHLLSSNSSRSSSFLPVKRPLPSPFGSPSGSSSSNKRFHGDLNGTGGISNTSADENSSFISLLSQLPPPHQSRTTFHHPNALLGDGVLRQQFQLPSLNWTS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0928 332 FunFam NAC transcription factor 56 24 181 - -
Prci3g0928 332 SUPERFAMILY NAC domain 11 151 IPR036093 GO:0003677|GO:0006355
Prci3g0928 332 PANTHER NAC TRANSCRIPTION FACTOR 56 15 158 - -
Prci3g0928 332 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Prci3g0928 332 MobiDBLite consensus disorder prediction 234 282 - -
Prci3g0928 332 MobiDBLite consensus disorder prediction 256 282 - -
Prci3g0928 332 ProSiteProfiles NAC domain profile. 15 160 IPR003441 GO:0003677|GO:0006355
Prci3g0928 332 MobiDBLite consensus disorder prediction 148 179 - -
Prci3g0928 332 MobiDBLite consensus disorder prediction 148 176 - -
Prci3g0928 332 Gene3D NAC domain 24 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0928 Prci-Chr3 11953193 11954748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0928 5 332 NAC Transcription Factor Family AT1G61110 52.199 2.70e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci3g0928 NAM 4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0928 - - qsa:O6P43_031801 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0928 3 11953193 11954748 Prci3g0928 3 11953193 11954748 CCT