Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0927 ATGGATATTCTGTTAAAAGTGAAAATTTTCTGCACATTGGCTATTGTTCTTGGGCTATTTTGTGCAAAGCCTGTTGCATCTTCCAGACACAGGCAATATTGTCCCGGGAGTAAAATGAGTTCTGGAAATAATAATGAGGATCGCGTCAACAGCTTGCCTGGTCAGCCTCATGCAGATTTCCAGCACTTTGCTGGCTATGTCACTGCGAACGAAACTAATGGAAGAGCACTCTTTTACTGGTTTTACGAGGCCACCACCAAACCTCAAGAGAAACCCTTAGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACGCAGGAGATTGGCCCGTTTTTAGTGGACAATGATGGCCTTAAATATAATAACTTCTCATGGAATAGAGAAGCCAATGTTTTATTCGTGGAATCTCCTGTTGGTGTCGGCTTTTCCTACTCAAACACAACCAGTGATTATGAACATCTCGGAGATGACTTCACAGCTAATGATGCTTACAATTTTCTGCACAAGTGGTTTCTTAAGTTTCCATCTTATAGAACTAGGACGTTTTACATAGCAGGAGAGAGCTATGCAGGAAAGTATGTACCAGAGCTTGCTGAGCTCATCGTTGATAGGAACAAGGACCCTTCGCTTCATATTGATCTTAAGGGTATCCTGCTGGGAAATCCAGAAACATCTGATGCTGAGGATTGGATGGGTATTGTGGACTATGCTTGGAGCCACGCCGTAATATCAGATGAAACTCATAGAGCAATCAGAGAAAGTTGTGACTTCAAAAGCAGTAACCCATGGAGCAACCAAACTTGTTGTGATGCTGTGGATGAATTGCTTGCACAGTACCACAAGATTGATATGTATAGCCTCTACACTCCTGTCTGCTTCGCCAATACTGCACATTCCAATGACCAATCTACGCAAGGCCTTATGAGTTACAAGCGCTCATCATTGAAAATGATGCCTAGGATCATGGGTGGTTTCGATCCATGTTTGGATGATTATGCCACAGCTTTCTATAACAGACCAGATGTTCAGAAGGCTCTTCATGCCAGTGATGGTCAGAGTCTTAAGAATTGGAGTATTTGCAACTTCAAGATATTCAACAATTGGGAAGATTCAAAGCCATCAGTTATCCCAATTTACAAGAAGCTAATCTCTGCAGGACTTAGAATCTGGGTTTACAGTGGAGACACGGATGGTAGAGTGCCAGTACTGTCCACAAGATACAGCTTAAGTACTCTGAATTTGCGTATCACCAAGACATGGAGACCATGGTATCACGAGAAGGAGGTAAGTGGGTGGTTTCAAGAATACGAGGGGCTTACTTTTGCAACATTTCGAGGAGCTGGACATGACGTGCCTAGTTTCAAACCAAGCAATTCACTTGCATTCTTCTCCTCCTTTCTGCTCGGACAGTCCCCACCAGAAACTAAATAA 1449 0.4334 MDILLKVKIFCTLAIVLGLFCAKPVASSRHRQYCPGSKMSSGNNNEDRVNSLPGQPHADFQHFAGYVTANETNGRALFYWFYEATTKPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDNDGLKYNNFSWNREANVLFVESPVGVGFSYSNTTSDYEHLGDDFTANDAYNFLHKWFLKFPSYRTRTFYIAGESYAGKYVPELAELIVDRNKDPSLHIDLKGILLGNPETSDAEDWMGIVDYAWSHAVISDETHRAIRESCDFKSSNPWSNQTCCDAVDELLAQYHKIDMYSLYTPVCFANTAHSNDQSTQGLMSYKRSSLKMMPRIMGGFDPCLDDYATAFYNRPDVQKALHASDGQSLKNWSICNFKIFNNWEDSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSTLNLRITKTWRPWYHEKEVSGWFQEYEGLTFATFRGAGHDVPSFKPSNSLAFFSSFLLGQSPPETK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0927 482 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 48 462 IPR001563 GO:0004185|GO:0006508
Prci3g0927 482 FunFam Carboxypeptidase 332 477 - -
Prci3g0927 482 Gene3D - 334 370 - -
Prci3g0927 482 FunFam Carboxypeptidase 381 475 - -
Prci3g0927 482 Gene3D - 381 475 - -
Prci3g0927 482 Pfam Serine carboxypeptidase 56 473 IPR001563 GO:0004185|GO:0006508
Prci3g0927 482 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Prci3g0927 482 SUPERFAMILY alpha/beta-Hydrolases 44 477 IPR029058 -
Prci3g0927 482 FunFam Carboxypeptidase 43 300 - -
Prci3g0927 482 Gene3D alpha/beta hydrolase 43 300 IPR029058 -
Prci3g0927 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Prci3g0927 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Prci3g0927 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Prci3g0927 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0927 Prci-Chr3 11933546 11937076 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0927 339 476 Calmodulin-binding Proteins AT2G22960 33.813 5.39e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0927 K16297 - gmx:100815993 776.548