Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0925 ATGGATATTCTGTTAAAAGTGAAAATTTTCTGCAGCTTGGCTCTTGTACTTGTGCTGATATGTGCGAAGCCTGTTGTATCTTCGAGGCACAGGCAATATCAAAGGGGTGATCATGGGAGGAAACTGAGTTCTGGGGATGGTAATGAGGATCTTGTCACCAACTTGCCTGGTCAGCCTCGTGCAGATTTCCGGCACTTTGCTGGCTATGTCACAGTGAATGAAACTAATGGAAGAGCACTCTTTTACTGGTTTTACGAGGCCATCATCAATCCTCAAGAAAAACCATTGGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCAGTGGGATATGGAGCAACACAGGAGATTGGCCCTTTTTTAGTGGACATTAATGGCCAGGGTCTTAGATTTAATAACTTCTCATGGAACAAGGCCAACGTTTTATTCGTGGAATCTCCTATTGGGGTCGGCTTTTCCTATTCAAACACAACCAGTGATTATGAACATCTTGGAGATGACTTCACAGCTAATGATGCTTACAATTTTCTGCACAAGTGGTTTCTCAAGTTTCCATCTCACAGAACTAGGACATTTTACATCGCAGGAGAGAGTTATGCAGGAAAGTATGTACCAGAACTTGCTGAGCTCATCGTTGATAGGAACAAGGACCCTTCGATTCATATTGATCTTAAGGGTATCCTGCTGGGGAATCCAGAAACATCTGATGCTGAGGACTGGACGGGTATTGTGGATTATGCTTGGAGCCACGCAGTGGTATCAGATGAAACTTACAGAACAATCAGAGAGAGCTGTGACTTCAAAAGCAGTGATCCTTGGAAGAACCAAACTTGCTGTGATGCTGTGGACGAAGTGTTCTCACAGTACGGCAAAATTGATATCTATAGCATCTATACCTCTGTCTGCTTCGCCAGCACCGCACGCTCAAATGATCAATCCCTGCGAGGCCGACGCGTCATGAAATATAAGCGTTCATCCAAAATGATGCCAAGGATCATGGGTGGTTACGATCCATGTTTGGATGATTATGCCACAGCTTTCTATAACAGGCCAGATGTTCAGAAGGCTCTTCATGCCAGTGATGGTCATAGTCTCAAGAATTGGAGTATTTGCAACGACAAGATGTTCAAGGACTGGAGAGATTCAAAGCCATCTATGATCCCGATTTATAAGAAACTTATTTCGGCAGGACTGAGAATCTGGATTTACAGTGGAGACACAGATGGTAGAGTGCCAGTACTCTCCACAAGATACAGTTTAAGTACTCTGAATTTGCGTATCACCAAGCCATGGAGACCATGGTATCACGAGAACGAGGTAAGTGGGTGGTTTCAAGAATACGAGGGGCTTACTTTTGCAACGTTTCGAGGAGCTGGACATGCAGTGCCTTGTTTCAAACCCAGCAATTCACTCGCACTCTTCTCTGCCTTTCTGCTTGGACTACCACCTCCTACTAAATAA 1461 0.4456 MDILLKVKIFCSLALVLVLICAKPVVSSRHRQYQRGDHGRKLSSGDGNEDLVTNLPGQPRADFRHFAGYVTVNETNGRALFYWFYEAIINPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDINGQGLRFNNFSWNKANVLFVESPIGVGFSYSNTTSDYEHLGDDFTANDAYNFLHKWFLKFPSHRTRTFYIAGESYAGKYVPELAELIVDRNKDPSIHIDLKGILLGNPETSDAEDWTGIVDYAWSHAVVSDETYRTIRESCDFKSSDPWKNQTCCDAVDEVFSQYGKIDIYSIYTSVCFASTARSNDQSLRGRRVMKYKRSSKMMPRIMGGYDPCLDDYATAFYNRPDVQKALHASDGHSLKNWSICNDKMFKDWRDSKPSMIPIYKKLISAGLRIWIYSGDTDGRVPVLSTRYSLSTLNLRITKPWRPWYHENEVSGWFQEYEGLTFATFRGAGHAVPCFKPSNSLALFSAFLLGLPPPTK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0925 486 Gene3D - 339 375 - -
Prci3g0925 486 Gene3D - 386 480 - -
Prci3g0925 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Prci3g0925 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
Prci3g0925 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Prci3g0925 486 SUPERFAMILY alpha/beta-Hydrolases 48 483 IPR029058 -
Prci3g0925 486 Pfam Serine carboxypeptidase 59 478 IPR001563 GO:0004185|GO:0006508
Prci3g0925 486 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Prci3g0925 486 FunFam Carboxypeptidase 337 482 - -
Prci3g0925 486 FunFam Carboxypeptidase 46 304 - -
Prci3g0925 486 Gene3D alpha/beta hydrolase 47 304 IPR029058 -
Prci3g0925 486 MobiDBLite consensus disorder prediction 32 51 - -
Prci3g0925 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 51 467 IPR001563 GO:0004185|GO:0006508
Prci3g0925 486 FunFam Carboxypeptidase 386 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0925 Prci-Chr3 11851057 11854603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0925 344 482 Calmodulin-binding Proteins AT2G22960 35.000 7.45e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0925 K16297 - gmx:100793427 783.097