Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0895 ATGGACGTCGTTGGATCTATGGTAAGCATCCTGAGCTGCTTGTGCTCTCGGAACTCACTGCAACAATCACTTGAAAGACAGTGTAAGCATCTGAGAAAACCAAAAAAGAATTTGAACAAGCTAAAAGAGTTAGTGGAACAGCTAGATGCTCGCAGATCAGATGTGAACACTAAACTCAATCAAATGTGGCTGGAAAAAGGGATGAACCCAAGAGAAGAGGTGAAGCTGTGGATGAAAAGTGTTGATCGAGTTAGAATCCAAGTGAGCAGCCTCACGGAGAATAACAATGGATGTTCCTTCAACTTTCTTTGTTCACGAATAAAATTCGGAGGAGTAGTGGAAGAGAAGATCAGTGAGGTCCAAGAGCTTCTTGACAAGGGTCAGTTCTTGGATGAATCAGTGGTGGCTGAAAACTTGCCCAAGGTAGGGTACACTCTTCCTGCATCACCATTGATGGAGTGTGCCACAACCATGCAAAGTTTAATGAGGATATTGGAATGCTTATCACAAGAGAGTGCGAAAAGGATTGGAGTTTATGGAATGGGAGGAGTAGGCAAGACAACTATCATGACAGAAATCAACAATCGTCTGTTAGAAGGGAGGGATTTTGATCTTGTCATATGGGTTTCTGCACCAAAAGAGCCAAGCCTAGTGAAACTACAGAAGGGTATTGGAGAGAAGTTGGAATTAGATCTTTCAATGATAGATGATGATGTTACTAGAGCAGCCAAGCTATTTGAGGCTCTAAACAGAAGGAGGAGATACACACTGATTCTGGACGATTTATGGGAGCCATTCTCTCTTGAAACAGCTGGAATACCGATACCAACAGTTGAGAATGGCTGCAAGTTGGTGATCACTACGCGGTTGTTGAGTGTTTGTCGGGGTATGGAGACAGATGAGGATGTAGAAGTGAAGGCCCTTCAAGATGATGAGGCATGGGATCTCTTAAGGTATAAAGTTGGAATGGTAGTGTCAAATTCTCCAGAAGTAGAGATGATTGCAAAGGAAGTGACAAAAGAGTGTGGAGGTTTGCCTCTTGCCATTGTTACAGTAGGACGAGCCTTGAGAAATGCTGCTGATGTATCAGAGTGGGAGTGTGCATTAGCTGAGTTAAGAGCCTCAACAGCAAATATTGAAAGGATGGAAGAAACAGTGTTTGCACACTTGAGATTTAGCTATGCCAAGCTAAAGGATGATACAAGCAGATCTTGTTTCCTCTTTTGTGCTTTATATCCTGAAAGCCATCAGATTGATACCAATGAGCTGATGGAGTATTGGATGTGGGAAGGTTTATTGGGTTATGTTGGAGGAATCTCTGCAATCAAGAGGAGGGGAAAAATCATATTGAATGAATTAAAACATGCATGCTTGTTAGAGGGTGTGACTCAAAATGCAGTGGAATTCGTCAGAATGCATGATTTGATAAGAGACATGGCCATTACAATCATGAGAACGAACCCTCACTGCATAAGTAAAGCTGGAACTAGAATGACAAAACATCAATGGATGGAGGAATGGACAGAAGATGTTCAAAGGGTCTCGCTGATGAGAAATGACTTGAAATGTATTCCCTTCAATTACAACCTCATGTTCCCTAGACTTACTTCCTTATTGTTTCAATTCAACTCATTTTCTGAAAATATATCCCATGAATTCTTTGAAAATATGCAATTTCTGAAAGTTCTGGACCTCTCCTACACTGGGATTGATTTCTTGCCTAATTCAGTATCTAATTTAGACAACTTATCTGCTTTGTTATTGAGCAACTGCTGGAATTTATCAACAGTTCCTTCTTTAGCAAAACTGAACAAGCTGATGGTCCTTGATCTCTCTTGCTCTCCAAGAATGAAAGAACTTCCAAATGGGATGCAAAATTTGGGAAACTTGAGACGCTTGAATATTTCCAAGACAGGAATTGAAATCTTCCCATTTGGATTGATATCCAAATTCACACTTTTGGAAGACTTACTGATAGGTGGTTGTGGTATCTTGTGGGGATCAATGACAGTCAAAGCCATTAGCGGTGGAGCTACCATTGAAGAAGTCATTTCCTTAAATCTATCTTCCCTTGAACTAGACTTGTGGAATGCAGATGTGTTTGATCAATATGCCAAATCTGTTCACTGGGTTCAGCTGGATAAGTTCAGGATAACGGTTGGGCAGCCTCAAGCACAGTTTTATGAAGAGAGAAGCTTGGCCTTTAGTGGAAGATTTGTTCTAAGAGGAAACCCAGTTTCTCTACCACCAAACACCTTGGAGCTGCATTTGGATGACTCTGCTGATATCAAGCATCTAAGCATGTGCTTAGTGAATGTGGCACAGCTGAAATCCTGTAAAATCAGGTGGTGTGATAACATTGAAGGAATAATTGACTCAGAGGAAGAGGAAAACACTTTATCCATGTTAGAAAGGATGGAACTTTTAGTTCTGGGAAACTTGAAGATGATATGTAGGGATGAAGTGAGACCTGGCACTCTTACAAGCTTGAAGATCATTACTGTGGAATATTGTCCAAAACTGAAGACTCTATTCTCAGGGCAGCTTTTGCTTCAACTGAGGAATCTGGAAGAAATTAGTGTCCGCAGTTGTACTGGTATGGAGTACATAATGAAAGGAGAAGAGAGAGATTTCATGGGAGGTAATGGTTCCAGAATTGAGTTTCCAAAGTTGAAGAGGATGAAACTGAAGTTCATGCCCCTTTTGGAGAGTATATATGATGGAACCATTTTTTGCCCTTCTTTAAGAAGTCTTGAAGTAGCATCCTGTGAAGCTCTGAAGAGGCTTCCTCTTGATCTGTCAACAACACCTGCTCTTGAAGAAATCAAAGCAACCAGAACATGGTGGAACTCATTGGCGTGGGATCAACCTAACTCAAAAGATATCCTGCAACCTTACTTTGTAGAAATTAGATTGACAAGTACGAGTGACAGATAA 2937 0.4099 MDVVGSMVSILSCLCSRNSLQQSLERQCKHLRKPKKNLNKLKELVEQLDARRSDVNTKLNQMWLEKGMNPREEVKLWMKSVDRVRIQVSSLTENNNGCSFNFLCSRIKFGGVVEEKISEVQELLDKGQFLDESVVAENLPKVGYTLPASPLMECATTMQSLMRILECLSQESAKRIGVYGMGGVGKTTIMTEINNRLLEGRDFDLVIWVSAPKEPSLVKLQKGIGEKLELDLSMIDDDVTRAAKLFEALNRRRRYTLILDDLWEPFSLETAGIPIPTVENGCKLVITTRLLSVCRGMETDEDVEVKALQDDEAWDLLRYKVGMVVSNSPEVEMIAKEVTKECGGLPLAIVTVGRALRNAADVSEWECALAELRASTANIERMEETVFAHLRFSYAKLKDDTSRSCFLFCALYPESHQIDTNELMEYWMWEGLLGYVGGISAIKRRGKIILNELKHACLLEGVTQNAVEFVRMHDLIRDMAITIMRTNPHCISKAGTRMTKHQWMEEWTEDVQRVSLMRNDLKCIPFNYNLMFPRLTSLLFQFNSFSENISHEFFENMQFLKVLDLSYTGIDFLPNSVSNLDNLSALLLSNCWNLSTVPSLAKLNKLMVLDLSCSPRMKELPNGMQNLGNLRRLNISKTGIEIFPFGLISKFTLLEDLLIGGCGILWGSMTVKAISGGATIEEVISLNLSSLELDLWNADVFDQYAKSVHWVQLDKFRITVGQPQAQFYEERSLAFSGRFVLRGNPVSLPPNTLELHLDDSADIKHLSMCLVNVAQLKSCKIRWCDNIEGIIDSEEEENTLSMLERMELLVLGNLKMICRDEVRPGTLTSLKIITVEYCPKLKTLFSGQLLLQLRNLEEISVRSCTGMEYIMKGEERDFMGGNGSRIEFPKLKRMKLKFMPLLESIYDGTIFCPSLRSLEVASCEALKRLPLDLSTTPALEEIKATRTWWNSLAWDQPNSKDILQPYFVEIRLTSTSDR 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0895 978 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 938 - -
Prci3g0895 978 Pfam NB-ARC domain 160 394 IPR002182 GO:0043531
Prci3g0895 978 FunFam Probable disease resistance protein At1g61300 149 302 - -
Prci3g0895 978 FunFam Probable disease resistance protein At1g63360 394 482 - -
Prci3g0895 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 409 IPR027417 -
Prci3g0895 978 Gene3D - 308 393 IPR042197 -
Prci3g0895 978 Coils Coil 31 58 - -
Prci3g0895 978 FunFam Probable disease resistance protein At5g66910 307 393 - -
Prci3g0895 978 Gene3D Ribonuclease Inhibitor 731 960 IPR032675 -
Prci3g0895 978 Gene3D - 142 307 IPR027417 -
Prci3g0895 978 Gene3D Ribonuclease Inhibitor 483 718 IPR032675 -
Prci3g0895 978 Pfam Leucine rich repeat 533 591 IPR001611 GO:0005515
Prci3g0895 978 Gene3D - 394 482 IPR036388 -
Prci3g0895 978 PRINTS Disease resistance protein signature 175 190 - -
Prci3g0895 978 PRINTS Disease resistance protein signature 249 263 - -
Prci3g0895 978 PRINTS Disease resistance protein signature 342 356 - -
Prci3g0895 978 PRINTS Disease resistance protein signature 601 617 - -
Prci3g0895 978 SUPERFAMILY L domain-like 471 936 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0895 Prci-Chr3 11413511 11416447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0895 176 635 WRKY Transcription Factor Family AT5G45050 21.795 9.59e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0895 K13459 - qsa:O6P43_012576 1140.56