Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0885 ATGCAAACCAGATATTTGGAGAGATCGGGTAGTATGGCCAGAGAAAAGCGAGGCCTGGATTCGACTTCGGCTGAGGAAGATCAGCCTGATAGGAAGCGGCCTGCTTTAGCCAGTGTAATTGTTGAAGCTCTCAAAGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCAATTCTACGGAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAATTAGGTCCTGCCAAGCTTTCTGGGAGGACATCTCCTAAACGCATAGAAGGTCCTGATGGCAGAATTTTACAGTTGCACTTTAAGACCAGGCTATCCCTTCCCCTGTTTACTGGAGGGAAAGTGGAGGGGGAACAAGGTGCTTCCATTCACATTGTTTTAATTGACGGAAACACAGGCCATGTCATCACATCTGGCCCAGAGTCTTCAGTGAGGCTGGATGTTATTGTGCTTGAAGGGGATTTCAACAATGAGGATGATGATAATTGGAGTGAAGAAGAATTTGAGAGCCATGTCGTCAAGGAGAGGGAAGGAAAAAGGCCTCTCCTAACTGGAGATTTGCAAGTTACTCTGAAAGAGGGTGTAGGAACACTGGGTGAGCTTACATTTACTGACAATTCTAGCTGGATAAGGAGTAGGAAATTCAGGCTGGGGCTTAGAGTTGCCTCAGGTTGCTGTGAGGGGATTCGTATTCGTGAAGCCAAAACAGAAGCCTTCACTGTTAAAGATCACCGTGGAGAATTATACAAGAAACACTATCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGAAAGGATGGGTCTTTTCACAAGAGGCTAAATAAAGCAGGAATAGTCACTGTTGAAGACTTCCTTCGGCTTGTGGTCAGAGACCCTCAGAGGTTGCGAAATATTCTTGGGAGTGGCATGTCTAACAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTTAGTGGAAAGCTTTATGTATACTATCCGGAAGATGCAAGGAATGTTGGCGTTGTTTTCAACAACATATATGAGTTCAGTGGCTTAATTACTAATGAACAGTATTATTCAGCTGATTATCTCTCTGAAAGTCAAAAGGTTTTTGTTGACACATTGGTGAAGAAGGCATATGATAATTGGATGCATGTTGTAGAGTACGATGGAGAGTCTCTGATAAATTACAATCAGAATAAGACTTTGGGTAATTCTCAACCCCAGCTTCCGATGGGTTCACATGATTATTCAAACTCACTTGATCAGCAGATCTCCATCCCAAGTTTGCCTGTTGCAGTGCCTGCGGGGCAGCCTCCCATGGATTCAGGGGTAGCAATTGGAGGTTATCATGACGCATCAGCCGCCAGATTTTCAATGCAAGCACAACATGCTAATCTTAATTCTTCAATTCAGTTTGATGGTACTGACATGACACTACAAAACCAGTTGATGAGCTCTTCAGACCAACCTCAACTTTCAAGGAATGAAGATGGGCTGACTCTTGGTCCGCCTCAGTCAGGTGCACCAGGATTTCAGAATGTCAGCATGTCAAATCCTTCTTATAGAGGCTTCGAAGACTTATTCCATGAGGAGGAGATCCGTATTAGAAGCCATGAAATGCTAGAAAATGAAGATATGCAGCATCTACTCCGTATTTTTAACATGGGAGGTCATGCTCATACTTCCTTTAATGCTCCTGAATATGGGTACCCCGGTACATCTGCTTATGTGCCTACTTCCCCCGTGACCTATGATGATGATCGAAACCGCTCCTCCGGAAAAGCTGTTGTGGGCTGGCTCAAGCTCAAGGCAGCTTTGAGATGGGGTATTTTTATTCGGAAGAAGGCTGCTGAAAGACGGGCTCAACTTGTTGAGTTGGATGATTCATAG 1893 0.4459 MQTRYLERSGSMAREKRGLDSTSAEEDQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLSGRTSPKRIEGPDGRILQLHFKTRLSLPLFTGGKVEGEQGASIHIVLIDGNTGHVITSGPESSVRLDVIVLEGDFNNEDDDNWSEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLRVASGCCEGIRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIVTVEDFLRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPEDARNVGVVFNNIYEFSGLITNEQYYSADYLSESQKVFVDTLVKKAYDNWMHVVEYDGESLINYNQNKTLGNSQPQLPMGSHDYSNSLDQQISIPSLPVAVPAGQPPMDSGVAIGGYHDASAARFSMQAQHANLNSSIQFDGTDMTLQNQLMSSSDQPQLSRNEDGLTLGPPQSGAPGFQNVSMSNPSYRGFEDLFHEEEIRIRSHEMLENEDMQHLLRIFNMGGHAHTSFNAPEYGYPGTSAYVPTSPVTYDDDRNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0885 630 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Prci3g0885 630 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Prci3g0885 630 MobiDBLite consensus disorder prediction 1 32 - -
Prci3g0885 630 PANTHER OS02G0177800 PROTEIN 12 547 IPR012416 GO:0005516
Prci3g0885 630 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Prci3g0885 630 MobiDBLite consensus disorder prediction 484 513 - -
Prci3g0885 630 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0885 Prci-Chr3 11254144 11259447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0885 11 625 Calmodulin-binding Proteins AT5G57580 63.636 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0885 - - gmx:100812605 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0885 3 11254144 11259447 Prci3g0885 3 11254144 11259447 CCT