Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci3g0868 | ATGGATAATCCTGCTGGTGACTCCAATGAAGGTAATTCAACAAACAACAATAACACTGCTAATAATTTCACCTCAGAGCCATCTTTAGGTAACGACTTGGAAAGCCTTGTGGATATGTTTGCTTCGTTATCAAACACCATCACTCAGCATGATGATCGCCCTGATGGACATGTTAATCGCGCTCTTGATGGGTTAATAGAGGAACTGATGATCATAGGCGGCCATGATCGTGAAGATCTTGTGATTGAAGATGAGGAAGATGTTAGTGTGTTTGCGGACGAGATGATGAGGAACGAGCATGACGAAATGATGAGGAACATCATCGGAAATAGTGAAGCTGTCAGACTGGTTCCAGCAACTGAAGAATCCATTGAGGGATTGGAGAAGGTGACTGTTGAACAAAATGAAGCTGAAGGAAGCACAGAGGGAAATAAGTATGACTGTTCTATTTGTTTTGAAGATTTTTTGAACGACCCAGAAGCTGCTCGTATGCCTTGCTCTCATTTGTTTCACAAAAAATGCATCACTGATTGGCTGCGTACTCGCAATGCTTGTCCTCTCTGTCGCTTTCAAATGCCTACAGATTAA | 588 | 0.4235 | MDNPAGDSNEGNSTNNNNTANNFTSEPSLGNDLESLVDMFASLSNTITQHDDRPDGHVNRALDGLIEELMIIGGHDREDLVIEDEEDVSVFADEMMRNEHDEMMRNIIGNSEAVRLVPATEESIEGLEKVTVEQNEAEGSTEGNKYDCSICFEDFLNDPEAARMPCSHLFHKKCITDWLRTRNACPLCRFQMPTD | 195 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci3g0868 | 195 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 43 | 193 | - | - | |
Prci3g0868 | 195 | Pfam | Ring finger domain | 147 | 189 | IPR001841 | - | |
Prci3g0868 | 195 | ProSiteProfiles | Zinc finger RING-type profile. | 148 | 189 | IPR001841 | - | |
Prci3g0868 | 195 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 106 | 194 | IPR013083 | - | |
Prci3g0868 | 195 | SUPERFAMILY | RING/U-box | 147 | 193 | - | - | |
Prci3g0868 | 195 | SMART | ringv_2 | 147 | 189 | IPR011016 | GO:0008270 | |
Prci3g0868 | 195 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Prci3g0868 | 195 | FunFam | E3 ubiquitin-protein ligase RNF181 | 108 | 195 | - | - | |
Prci3g0868 | 195 | CDD | RING-H2_PA-TM-RING | 147 | 189 | - | - | |
Prci3g0868 | 195 | SMART | ring_2 | 148 | 188 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci3g0868 | Prci-Chr3 | 11169559 | 11170146 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci3g0868 | 101 | 195 | C3H Transcription Factor Family | AT3G02340 | 31.579 | 2.64e-15 | 71.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci3g0868 | - | - | pcin:129305393 | 384.415 |