Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0867 ATGGATCCTGTAGACCCCAATGAAGCTTATTCAACAAACACCAATGCCGCTGTTTCTACCGATGATTTGAACTCATCACCTTCAAGTGATCATCAATTCTTTAGCATTGATGTTGAATGCAAAATCTTTTCTGCTTTGAATGGTGTCCTTGTAGATGGTCTCACCGATACCATTCAGTGTGGTATCACTATTGTCCCAAAAGAGGATATAGAACGATTTATATACATGCTTTTTTCTTATTTTGATGTTCCAGAGAATGCTCAACCTCGCATGGCTGCAAAAATCTTGGCATGTACAGAAGAAATTGTGAATGAGTCGCCAAAGAATAAGAAGATTCTGGATTTGTATATTGTTCTAGCTCATATTAGCCAAATTCAAAACTATAATGATATTGGGCTTGTGGATGAATCCATAACTGATAGTGAAGATATGAGACTTGTACCCGCAAGCAAGTCATCCATCGAGGGATTGGAGAAGGTGAATGTGGATGAGCAGAAAGAAGGAAGTGCAAAAGGAAGGTGTGATTGTGCAATTTGTTTTGAAGATTTTTCAATTGATTCTGAAGCTGTTCGTATGCCTTGCTTTCATTTATTTCACAGAACATGCATCACTAGACGGCTGCATCATCGCAATACTTGTCCTCTCTGTCGATTTCAAATGCCTACAGAAAATGATGATGATCATGATGGTGATGATGATGAATGA 705 0.383 MDPVDPNEAYSTNTNAAVSTDDLNSSPSSDHQFFSIDVECKIFSALNGVLVDGLTDTIQCGITIVPKEDIERFIYMLFSYFDVPENAQPRMAAKILACTEEIVNESPKNKKILDLYIVLAHISQIQNYNDIGLVDESITDSEDMRLVPASKSSIEGLEKVNVDEQKEGSAKGRCDCAICFEDFSIDSEAVRMPCFHLFHRTCITRRLHHRNTCPLCRFQMPTENDDDHDGDDDE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0867 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 223 IPR013083 -
Prci3g0867 234 MobiDBLite consensus disorder prediction 7 24 - -
Prci3g0867 234 ProSiteProfiles Zinc finger RING-type profile. 176 217 IPR001841 -
Prci3g0867 234 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 61 221 - -
Prci3g0867 234 CDD RING-H2_PA-TM-RING 175 217 - -
Prci3g0867 234 SMART ring_2 176 216 IPR001841 -
Prci3g0867 234 SUPERFAMILY RING/U-box 175 222 - -
Prci3g0867 234 Pfam Ring finger domain 175 217 IPR001841 -
Prci3g0867 234 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0867 Prci-Chr3 11162579 11163283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0867 136 230 C3H Transcription Factor Family AT5G01980 41.237 1.01e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0867 - - pcin:129305392 459.144