Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0857 ATGGGTGAGGAAGAGGGAAGGAGAAAAGCCATAACAGACCAGGATTCGCTGGAGTCGTTCGCCGGAGGCTTCAGTATCCCTCAAGCTGTGAAGCTTCTATCTTCCTTGATTTCTCTTTCTCATTCAGTCCGGGTCTTCGCGGCAAAATGGCAACCGATTCGGAACAAGCTCGAGGAGCTCCATTCAGGGCTAATCGCCGCCGAGAACTGCGATTCCGGCGAGAACCCGTCGCTCTCCGGTCTGGTTCCTGCGATACTGGCCACCGTGAATGATTGTCATGATCTCGCTCGCCGCTGCGTTGATCTTTCGTACAGCGGGAAGCTTTTGATGCAGAGCGATTTGGATGTGATGTTCGCCAGGTTCGCTTGTCACGTGAAGAAGCTATCAGAGGTATACTCGGCTGGTATTTTGACTCACAAGTATGCCCTCGTTGTTTCAAGGCCTAGTCTTGGAGCTTGCAAGGATGATATGAGGTTTTACATGAGGGACTTGCTGACGAGAATGAAGATTGGCGATGTGGGAATGAAGAGGCAGGCTCTGATGAATCTGCACGAGGCCGTGGCGGAAGACGAAAAGTATGTGAAAGTGATTGTGGAAATAGGAGATATTGTTCATGTTCTGGTGAAATTTCTTGATTCGCCGGAGATGGAAATCCAAGAAGAATCTGCCAAGATGCTTTCTGTTATCGCAGGCTTTGATTCCCACAGAGGGATTCTGATCACATCTGGGATTATTGCGCCTCTGATCCGAGTTTTGGAATGTGGGAGTGAGTCAGGGAAGGTTGGGGCTGCCAGGTGTTTGATGAAATTAACGTCCAATTCAGACAATGCCTGGTCGGTTTCAGCTCATGGGGGAGTCACGTGCTTGCTCAAAATCTGCTCTAATGGAGAACCCAAAGGAGAATTGGTTGCTTCTGCTTGCGGGGTGCTGAGAAATCTTGTGGGTGTTGAAGAAATAAAGAGATTCATGGTTGAAGAAGGTGCCGTTTCTGCGTTTATCAGGCTTGTGAAATCCAAGGACGAAGCGATTCAGGTAAATTCCATACAGTTTATTCAAAGTATAGCCTCTGGAGATGAACAGGTTAGGCAAATGGTGATTAGAGAAGGTGGCATTCGGGCTATAATACGTATTCTAGATCCTAAATGGTCATGTTCTTCTAAAACCAGGGAGATAGGAATGAGAGCTATTGAAAACTTGTGTTTTTCTTCGTCTAGTTCTGTAAGCATGTTAATGAATCATGGCTTTGTGGATCAACTGCTATATTACATCCGTAATGGGGAGGTTTCCATCCAAGAATTGGCTCTGAAAGTAGCGTTCAGATTCTGTGGAACATCAGAGGAGGCTAAGAAAGCCATGGGCGACGCAGGTTTCATGCCAGAGCTTGTTAAGTTTCTAAATGCAAAATCATTCGAAGTTCGTGAAATGGCAGCTGAGGCACTCTCTGCCATTGTTATGCTGCCCAAGAACAGAAAGAAATTTGTGCAGGATGACCAAAACATCGCTCTTCTTCTCCAATTGCTTGATCCAGAAGAGGGAAATTCAAGTCACAAAAGATTCTTAATCTCTATCTTAATGTCATTAACAAGTTGTAACAGTGGGAGAAAAAAGATTGTGAGTTCTGGGTATGCCAAAAACATAGAGAAACTTGCAGAAGCTGAAGTCTCATCCGATGCCAAGAGGCTTGTGAGGAAGCTATCCACAAACAGATTCCGCAGTATGTTAAGTGGAATCTGGCACTCATGA 1743 0.4584 MGEEEGRRKAITDQDSLESFAGGFSIPQAVKLLSSLISLSHSVRVFAAKWQPIRNKLEELHSGLIAAENCDSGENPSLSGLVPAILATVNDCHDLARRCVDLSYSGKLLMQSDLDVMFARFACHVKKLSEVYSAGILTHKYALVVSRPSLGACKDDMRFYMRDLLTRMKIGDVGMKRQALMNLHEAVAEDEKYVKVIVEIGDIVHVLVKFLDSPEMEIQEESAKMLSVIAGFDSHRGILITSGIIAPLIRVLECGSESGKVGAARCLMKLTSNSDNAWSVSAHGGVTCLLKICSNGEPKGELVASACGVLRNLVGVEEIKRFMVEEGAVSAFIRLVKSKDEAIQVNSIQFIQSIASGDEQVRQMVIREGGIRAIIRILDPKWSCSSKTREIGMRAIENLCFSSSSSVSMLMNHGFVDQLLYYIRNGEVSIQELALKVAFRFCGTSEEAKKAMGDAGFMPELVKFLNAKSFEVREMAAEALSAIVMLPKNRKKFVQDDQNIALLLQLLDPEEGNSSHKRFLISILMSLTSCNSGRKKIVSSGYAKNIEKLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0857 580 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 284 328 IPR000225 GO:0005515
Prci3g0857 580 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 327 370 IPR000225 GO:0005515
Prci3g0857 580 Pfam Armadillo/beta-catenin-like repeat 446 481 IPR000225 GO:0005515
Prci3g0857 580 SUPERFAMILY ARM repeat 162 561 IPR016024 -
Prci3g0857 580 Gene3D - 161 569 IPR011989 -
Prci3g0857 580 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 27 579 - -
Prci3g0857 580 SMART arm_5 232 272 IPR000225 GO:0005515
Prci3g0857 580 SMART arm_5 445 485 IPR000225 GO:0005515
Prci3g0857 580 SMART arm_5 358 401 IPR000225 GO:0005515
Prci3g0857 580 SMART arm_5 190 231 IPR000225 GO:0005515
Prci3g0857 580 SMART arm_5 273 315 IPR000225 GO:0005515
Prci3g0857 580 SMART arm_5 316 356 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0857 144 434 U-box Gene Family AT2G23140 26.599 2.94e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0857 - - qsa:O6P43_012559 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0857 3 11026001 11028373 Prci3g0857 3 11026001 11028373 CCT