Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0854 ATGGCAGAAGAGTTTGAAGCTGCTGGGATTTGTGGTGGGAATTGGTGGAATATGAGTACTTGTTCATCAAGAAGTGTATTATTTCCTCTCATCACCTCATCGCCATCATCATCCCTCTGTTCTATTGCAGCAAATAGCGATGGAGGCAACTTTAGTTGTACTTGGCAAACTGATAGTCTCGTAGATCTGAAGTCGCCTTTAGCTTCTGTTCATCATCATCATCATGATTCTCTGGGTTTTCTCGTTCAGCAGGAGCAAAACCAGAATGAATCACCATCAGCAGCAGCAACTACTGAAAATAATGGAAACATAATGATGGATTCCACCTTGGGCTTTGCATCAACTACTTCATCCAATAATTGGAATAACCACTCTTTGCTTGGGAGACCAGAAAGAAATTTTCATTCTGTGCTTGAAGAAGAAGCTGGTGGTGTAGATTCTTCGAATTCAGAAATGATCCAAAAGGATTGGAGCCCGAGCAAGGGACAGGTTTCATCCATTAAAGATGCTTTCAAGCCCATGAACCAAGAATTTGCAATAGATCAACAGAATAATCTGAGTTGTGCCTCATATGGTTACGGCCTATACGATAATGATGATGATGATGAACATAATAATCGTCTTCATCATCATCATCATCTTCAACCACAGCCACAACCAGAGGACTCGCTTTTTACCAACCCTTCTGTGGCTTATAATAGTTACAACAACAATCCATCCAATGAAGTTTCGCCATGTAATTGGTCCAAAGTCTCTGAGCACTTTTTGAAGCAGCCTTCGATGCCAAAACAGCAGCTCGGTGGACTCCACTTTTCAAACAACAACAACAACAACAATTCTCCTTTTTGGAATAATGCCTCAGCTGAAGCCCTTGATGACGTACCAGCACCACATGTTTTTGTTTCATCTCAACAATCTCAAACTTTTGAACAGCACAAACCCATTTGCTCAGCTCTCTTAACCAAGCACAAAAGAGAAGAGGCTCCTGTTTGTGAACCGGCTGCATTCAAAAGGCCCAGAATTGAAACCCCATCACCACTGCCAACTTTTAAGGTTCGAAAAGAAAAGTTAGGGGACCGAATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGACTGACACGGCATCTGTCCTTCACGAAGCTATCGAGTGCATCAAGTATCTTCATGATCAAGTCAGCGTTTTGAGTGCTTCATATTTGGACAACGGACCTCCTGTCCAACACTATCAGCGTTGTGATGAGAAAGAATCAAAAGGGACAAAACAAGATTTAAGAAGCCATGGATTGTGCTTGGCACCAATATCGAGCACTTTCTCACTTGCTAACTATGAGATGATGGCTTCTGAGTTATGGACGCATGCATATGGAGGAGCTCTCATGAGATAG 1392 0.4224 MAEEFEAAGICGGNWWNMSTCSSRSVLFPLITSSPSSSLCSIAANSDGGNFSCTWQTDSLVDLKSPLASVHHHHHDSLGFLVQQEQNQNESPSAAATTENNGNIMMDSTLGFASTTSSNNWNNHSLLGRPERNFHSVLEEEAGGVDSSNSEMIQKDWSPSKGQVSSIKDAFKPMNQEFAIDQQNNLSCASYGYGLYDNDDDDEHNNRLHHHHHLQPQPQPEDSLFTNPSVAYNSYNNNPSNEVSPCNWSKVSEHFLKQPSMPKQQLGGLHFSNNNNNNNSPFWNNASAEALDDVPAPHVFVSSQQSQTFEQHKPICSALLTKHKREEAPVCEPAAFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIECIKYLHDQVSVLSASYLDNGPPVQHYQRCDEKESKGTKQDLRSHGLCLAPISSTFSLANYEMMASELWTHAYGGALMR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0854 463 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 341 390 IPR011598 GO:0046983
Prci3g0854 463 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 351 405 IPR036638 GO:0046983
Prci3g0854 463 MobiDBLite consensus disorder prediction 147 164 - -
Prci3g0854 463 MobiDBLite consensus disorder prediction 199 217 - -
Prci3g0854 463 MobiDBLite consensus disorder prediction 142 164 - -
Prci3g0854 463 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 158 441 - -
Prci3g0854 463 MobiDBLite consensus disorder prediction 199 224 - -
Prci3g0854 463 CDD bHLH_AtbHLH_like 347 398 IPR045239 -
Prci3g0854 463 FunFam Transcription factor bHLH123 family 351 413 - -
Prci3g0854 463 Gene3D - 351 404 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0854 Prci-Chr3 11008360 11011773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0854 242 463 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 44.681 5.07e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0854 - - pcin:129306484 895.19