Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0844 ATGACGACTCAACACCCGGTGGAGTTCGACGCTGACTCCATCGCTTCTTCTCCTCGCTCCGACCATTTTCACGAACCCTTGCCCCGTGTCCGCTTCATGTGCAGCTTCGGTGGCAGGATATTACCCCGCCCCCACGATAACCAGCTCCGATACGTCGGTGGAGACACCCGAATCGTCGCCGTCAATCGTTCCATCTCTTTCTCCGGTCTCCTCCTCAAGCTCTCCAAGCTCTCAGGCACTACCAATATAACAGTGAAGTACCAGCTTCCCAATGAGGATCTAGACGCGTTGATTTCCGTGACGACGGACGAGGACGTGGAGAACATGATGGAGGAGTATGAGAGGGTAGCGCAGAATCAGAACCCGAGGTCGGCTCGTCTCCGGCTATTTCTGTTCGTTAAGGGAGAAGATTCTAGAGCCGGCAGTATCAGCTCCTTACTGGACGGCTCTGCCAACCGCGAGAGCTGGTTTGTCGACGCCCTCAATAGCGGCGTAGACAGGCTTGAACGGGGCCGTTCCGAGGCGTCGTCCATGATTTCTGAAGTTCCTGATTATCTCTTCGGGTTGGAAAACTCCGACGAGGCCCAAATCCGAGAACCAAGGTCGAAACTCCGACCGGTTGTCAATGACAGCGTCTCCTGTTCGGATCCTGGGTCGCCTGCTCCGGCTGTATCCTCTCCGTTTTGCTCCACCTCATCGGCTCCGAATGTGCCGTCCATGCCAAACCTCCCACCGGTTAAAACCAAACCGGATAACCCAGTTCCTGTTGTTGAATCGAAAGAATATCACATTGATGGTTTTCAACCCGGAAATCCAGCCGGTCAGGCACCTCACTACCCCTTGGATTCTACTTATCCGGGTCATTCTGTACAGCCAGTTCCAGTTTATTACTATCCGGGTCCGATTCCGGTTCAGCACGGGCAGGTGCCAGTCCAACCGGTAACAATTCAGGCGCCTTATATGCAGCCATACCCGGCGGTGGTGCCAGCTCAGGTGCCAGTGGGTTATCACCAAGTGGTTACAGGTTCGGCCCAAGCATACGCCGGAGGACTGAGACCCGTCGGTGGGATGCATCCATACGAAGCGGCGCCGACGGTTCTTCCTGATAGCATGAGGCAGCAAGCGTATCAAGCAGTGCCGAATTCCGGAGGTGCCACTGTTTATTCGGTGATGGCAATGGCCAGCGGGGACGAATCGCAGAGACCCGGAAATGAATACGGAACGGTTCGGGGCACCAACATGGAATGA 1248 0.5545 MTTQHPVEFDADSIASSPRSDHFHEPLPRVRFMCSFGGRILPRPHDNQLRYVGGDTRIVAVNRSISFSGLLLKLSKLSGTTNITVKYQLPNEDLDALISVTTDEDVENMMEEYERVAQNQNPRSARLRLFLFVKGEDSRAGSISSLLDGSANRESWFVDALNSGVDRLERGRSEASSMISEVPDYLFGLENSDEAQIREPRSKLRPVVNDSVSCSDPGSPAPAVSSPFCSTSSAPNVPSMPNLPPVKTKPDNPVPVVESKEYHIDGFQPGNPAGQAPHYPLDSTYPGHSVQPVPVYYYPGPIPVQHGQVPVQPVTIQAPYMQPYPAVVPAQVPVGYHQVVTGSAQAYAGGLRPVGGMHPYEAAPTVLPDSMRQQAYQAVPNSGGATVYSVMAMASGDESQRPGNEYGTVRGTNME 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0844 415 MobiDBLite consensus disorder prediction 1 20 - -
Prci3g0844 415 SMART PB1_new 44 134 IPR000270 GO:0005515
Prci3g0844 415 MobiDBLite consensus disorder prediction 401 415 - -
Prci3g0844 415 Pfam PB1 domain 45 133 IPR000270 GO:0005515
Prci3g0844 415 ProSiteProfiles PB1 domain profile. 29 134 IPR000270 GO:0005515
Prci3g0844 415 CDD PB1_UP2 33 132 - -
Prci3g0844 415 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 49 134 - -
Prci3g0844 415 MobiDBLite consensus disorder prediction 396 415 - -
Prci3g0844 415 Gene3D - 50 134 - -
Prci3g0844 415 PANTHER OS05G0427100 PROTEIN-RELATED 12 344 - -
Prci3g0844 415 SUPERFAMILY CAD & PB1 domains 45 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0844 Prci-Chr3 10873018 10874676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0844 19 132 MAP Kinase Kinase Kinase AT3G46920 50.000 2.47e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0844 - - gmx:100803004 475.707