Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0843 ATGGGTGAGGAGGAAGTTTTGCCGGATCATCTGCGCTGCAAGCGCACCGACGGGCGTAAATGGCGGTGTAACCGGAGAGTGATGGACAACGTGAAGCTTTGTGAGATTCACTATCTTCAAGGCCGCCATCGGCAATACAAGGAAAAGGTCCCGGAGTCGCTGAAGCTTCAGAGGAAGCGTAAGAAAGGGCATAATAAGGATGACTCTGTTCTCAGCAATGTCGAAGTGAAGGCACGGAAAGTGGTCAAGATGGCGAAGATGATGAAAAAAAGGATAAAAATGTCAGATGGTTCGGAGGCAATGGAAGCTCCTGTGGGGAAGAAGGCGTCCAAGCAGGGTAATAAGCAGTTGGAGCTGATAAGAATGGTGCTGAAGAGAGAGGTTGAGAAAAGGAAGAAGAAGCAGGGACAGAATATGAAGAGGAAGCAGGAGGAGGAGGAAGAGGAGGGATTACATTACAGTGAGGGAGAGTTAACAAAAACATTGCCCAATGGTTTGATGGCAATTTCTATGGCATCAACGGCCCAAGAATACTGCAATGTAGTTTCCCAATGTGATGTTAAATTATGTGCTGATCATAAGGCAATTACTCCACGTTACTTCAGGTCCAAGAATGTTGAAAGGCTGCCAGTGGGAAAGTTGCAGGTTTTACCGTATGGACGAAAATGTAAGAGGAAGAAGTGCCATTGGTGCCAGAGAAGCGATTCTTGGAATCTCATAAAATGTTCAAGCTGTCAAAAAGAGTTTTTCTGCATGGATTGCATTAAAGAACGGTATTTTGATACTCAAAATGAAGTTAAGATGGCATGTCCAGTTTGTCGAGGAACTTGCTCATGTAAAGACTGCTTGAGGAGTAAATGTAAAGATAACGAAACTAAGGAATTTTTGGCTGGTGAAAGCAAAGTTGATAGAATATTGCATTTTCATTATTTGATTTGTACGCTCCTTCCTATACTGAAAGAAATAAATGAAGACCACAATGCTGAGATAGAAACAGAAGCTAAAATGAGAGGTGAAAGACCGTCTGATATGCACATCAAGCAAATTGAATTTGGCAGCAATGAACAAACTTACTGCAATCACTGCAAAACACCCATTTTGGATCTCCATAGAAGCTGTCCAAGTTGTTCCTATAGCCTTTGCATAAGTTGTGGCAGGAAATTATGTCAAAAGAACTCCTCTGAAGAAATTAATGCATCTATTTCCGAGTCATCTGATGGGATGGATTGTCGACTTGCCAGTGAAAATCATCTTTTGGATAAGAAGACCATCTCCAACGGATATTCAGTAGCTTCTTTTTCATTGCGTAACTGCACAAACTATGATTGTCCTGGCAATGTATCTTGTCCTCCAAAAGAGCTTGGTGGTTGTGGTGATAGTCTTCTTGAATTAAGATGCGTTTTCCCCTTAAGATGGATCGAGGATATGGAAGTAACAGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACTTTGGACAAAAGTTTGAGCTGCTCATTGTGTCCAGACACAGATCATAAACTTGATGAATCCAAGCAGTTACGAGAAGCAGCTCTTAGAGAAGATTCAAAAGACAATTGGTTGTTTTATCCCACTGTCTTGGACATTGGTGGTGATAACTTTGAACATTTTCAGAAGCATTGGGGAAAAGGCCATCCTGTAGTAGTGCGAGATGTGCTCCAAAGCACATCAAACCTCAGCTGGGATCCACTGTTCATGTTCTGTACTTATCTTGAGGGCAGCATCACAAGATATGAGAATGACAAGGATGAACTTGAAGCTTGTTTGGATTGGTGTGAGGTGGAAATTAACATTAGGCAGTGCTTTACTGGATCTCTTAAATGTCAGCCACAGAAAAACATGTGGCACGAGATACTGAAATTGAAGTGGTTACTGTCTTCCAAACTATTCAAAGAATGGTTTCCAGCTCACTTTGCTGGAGTAATTGATGCCCTGCCACTTCAAGAATACATGAATCCTACCTCTGGTTTTCTGAATTTAGCTGTAAGTCTGGCACAGGGTGGTGCAAAGCATGACGTAGGGCCATATATCTATCTTTCATATGGCTGTGGTGATGAACAGAGTGACTTTGTGACGAAGCTGTCTTATGATTCATATGATGTGGTTAGTATTATGGCGCACACAACGGATATCCCTCTTTCTACAGAACAGTTGACTAAAATAAGGAAGCTGCAAAAACACCGAACTCTCTGTCGAAGGGATTCTTCTGAAATTAGTGCTGAACGATCAAAGGAACAGGGAGAGAAAGTAAATTCATTGTGGCCTGATGAAGATGTTGAAAAGACAGGGTTGCATCAAAAGGGGAGAGAGGAGAAGCACTTTCTCAGGAGAGTCAACAGAACCGCTTACATCTATTCTGAAGCAACAAATGTAGTTTATCAGAGTATAGACAGCAAAACTTTCCAGGATGAAGAATGTGATTCTGATACCGATTCTGAAAATCCCTATGGAAGTTCAAATAATTATAGGAATGAAAAGCTTATTAAACATTCTGGTGCCCAGTGGGATGTCTTTCGCAGACAAGATGTTCCAAAGCTCTTAGAATACCTTAAAAGACACTCTGCTGAATTTTCTCCTTCCCATGACTATCATGAGCAGCAGGTGGATCATCCACTTTTAGATCAGAGCTTCTTTCTTGACAATACTCACAAGATGAGGCTCAAGGAGGAATATAAAATTGAACCGTGGACTTTTGAGCAACGTGTCGGTGAAGCTGTCATAATTCCTGCTGGATGTCCATACCAGATTAGGAATTCTAAGTGTTGTGTTCATGTGGTATTGGAATTTGTTTCTCCTGAGAGTGTCGGCCAGTGTATCCAATTGATTGATGAAGCCCGTCAGCTTCCAGAAGACCACAAAGCAAAAGTTGACCATCTTGAGCTGAAGAAAATGGCTCTTTACAGCATCGATTCAGCAATAAAAGAGATACGTGAACTCACCTCCAAAATGTGA 2976 0.4167 MGEEEVLPDHLRCKRTDGRKWRCNRRVMDNVKLCEIHYLQGRHRQYKEKVPESLKLQRKRKKGHNKDDSVLSNVEVKARKVVKMAKMMKKRIKMSDGSEAMEAPVGKKASKQGNKQLELIRMVLKREVEKRKKKQGQNMKRKQEEEEEEGLHYSEGELTKTLPNGLMAISMASTAQEYCNVVSQCDVKLCADHKAITPRYFRSKNVERLPVGKLQVLPYGRKCKRKKCHWCQRSDSWNLIKCSSCQKEFFCMDCIKERYFDTQNEVKMACPVCRGTCSCKDCLRSKCKDNETKEFLAGESKVDRILHFHYLICTLLPILKEINEDHNAEIETEAKMRGERPSDMHIKQIEFGSNEQTYCNHCKTPILDLHRSCPSCSYSLCISCGRKLCQKNSSEEINASISESSDGMDCRLASENHLLDKKTISNGYSVASFSLRNCTNYDCPGNVSCPPKELGGCGDSLLELRCVFPLRWIEDMEVTAEEIVCSYDFPETLDKSLSCSLCPDTDHKLDESKQLREAALREDSKDNWLFYPTVLDIGGDNFEHFQKHWGKGHPVVVRDVLQSTSNLSWDPLFMFCTYLEGSITRYENDKDELEACLDWCEVEINIRQCFTGSLKCQPQKNMWHEILKLKWLLSSKLFKEWFPAHFAGVIDALPLQEYMNPTSGFLNLAVSLAQGGAKHDVGPYIYLSYGCGDEQSDFVTKLSYDSYDVVSIMAHTTDIPLSTEQLTKIRKLLXKHRTLCRRDSSEISAERSKEQGEKVNSLWPDEDVEKTGLHQKGREEKHFLRRVNRTAYIYSEATNVVYQSIDSKTFQDEECDSDTDSENPYGSSNNYRNEKLIKHSGAQWDVFRRQDVPKLLEYLKRHSAEFSPSHDYHEQQVDHPLLDQSFFLDNTHKMRLKEEYKIEPWTFEQRVGEAVIIPAGCPYQIRNSKCCVHVVLEFVSPESVGQCIQLIDEARQLPEDHKAKVDHLELKKMALYSIDSAIKEIRELTSKM 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0843 992 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 9 990 IPR045109 GO:0032454|GO:0033169
Prci3g0843 992 Gene3D Cupin 790 964 - -
Prci3g0843 992 Gene3D Cupin 535 789 - -
Prci3g0843 992 SUPERFAMILY Clavaminate synthase-like 541 979 - -
Prci3g0843 992 ProSiteProfiles WRC domain profile. 7 53 IPR014977 -
Prci3g0843 992 Coils Coil 125 149 - -
Prci3g0843 992 Pfam WRC 8 49 IPR014977 -
Prci3g0843 992 ProSiteProfiles Zinc finger RING-type profile. 228 274 IPR001841 -
Prci3g0843 992 SMART cupin_9 642 955 IPR003347 -
Prci3g0843 992 MobiDBLite consensus disorder prediction 129 154 - -
Prci3g0843 992 ProSiteProfiles JmjC domain profile. 661 955 IPR003347 -
Prci3g0843 992 MobiDBLite consensus disorder prediction 812 832 - -
Prci3g0843 992 Pfam JmjC domain, hydroxylase 826 936 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0843 Prci-Chr3 10853465 10861818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0843 8 47 GRF Transcription Factor Family AT2G22840 52.500 3.39e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci3g0843 JmjC 2e-11 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0843 K15601 - gmx:100810673 1222.22