Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0830 ATGTCTTTCCATGATTGTTCACTTTCCTTTGAAACTGGAGATATCAAGCATATTATTTCATCTCTCAAAGTTCTCAGAACATTCACTGAACTTCTGAGGGTAAAAGTAAAACTGAGAAAGAAGATGCGTGGGGATTTCTGGCTTTCTCTGAAGAGATCAATTCACTGCAAACCAAACCCATCAGAAGTTCATGAACCAGAAGCAATCACCCAACAGAGAATTCCTCAGAAGATTTCAGATTGCTTCCAAAGAACAAGCAATATTCTCTCAGAGAAACATAGAAGTGGCAGTCTAATCAAATCCTTACGGAGCAGTAATATCCTTAGCCCCATAACCCATGAAGTTGTCCTTAACATCTCCTGCCATGGATTTCGAACTTGTCGATGTTGTCCTCGTCCTTTAAATAAAGAAATGAGAGGTCCTCATGAATCAAGACGACCAACAACCACACCTTCAATGAGGACCCATGATGTTGATTGCAATGAATGTAACATATCTTCCTCAAATTCAAGGGTTTTGATGCAAACAGATTCTAATAATGATATTCCTTCAACTTTGATTTGTCCCAAGTGTGGTGAGAAACTCAAATGTGTTGACGCTGTTGAAACACACCATGTCTCCCAGCATTCAGGAATCAACTGTACTATGACTTCAGAATGTACCGTTTTTTCTTTCTGGGCAGTGATTGAACTTGATGAAGAAGATTCAACAAGGCAGATCATAGAAACAATATGCAGAGCCAGCTGGAGTAACTCTCAGACCAAGTCAGGGAAGATTGAGAGTTTGCTCAAAGTCCAGAACACGCCAAGAACCTTCGCTAGGTTTGAGGAATACAGACAAATGGTGAAGAACGAAGCTGAAAAGTCACACAAGAAGCAACCTCGTTGTCTGGCTGATGGCAATGAGCTTCTAAGGTTCCATGGCACAACCATCGCATGTTCACTGGGCACCAATGGCTCTTCTTCTTCTGGTTTGTGCAGTTCAGAACATTGTTGTGTGTGCCAGATTCTGAAACATGGGTCCTATGCAACCAACGAGTGTCATGGTTCATTTGGGGTCCTCACTACTTCAACTTGTGATAAGGCCTTTGAATCCATAGGGTCAGTTGATTCAGAATCTGATAATAAGGGACCATCTCTAAGGATGTCGGTTATGGTGTGTAGGGTAATAGCTGGGAGAGTTCTGTATAGTTCTCTGGAGGAAATTGAAGCAGTGGAGAATTATGGGTTTGATTCTTTGGCAGAGAAGACAAGTGGAGATTCAGAGATTGAAGAGCTTTATGTGTTAGATGCTAGAGCTATTCTTCCTTGCTTTGTGGTAATATACAAACATTGA 1335 0.4127 MSFHDCSLSFETGDIKHIISSLKVLRTFTELLRVKVKLRKKMRGDFWLSLKRSIHCKPNPSEVHEPEAITQQRIPQKISDCFQRTSNILSEKHRSGSLIKSLRSSNILSPITHEVVLNISCHGFRTCRCCPRPLNKEMRGPHESRRPTTTPSMRTHDVDCNECNISSSNSRVLMQTDSNNDIPSTLICPKCGEKLKCVDAVETHHVSQHSGINCTMTSECTVFSFWAVIELDEEDSTRQIIETICRASWSNSQTKSGKIESLLKVQNTPRTFARFEEYRQMVKNEAEKSHKKQPRCLADGNELLRFHGTTIACSLGTNGSSSSGLCSSEHCCVCQILKHGSYATNECHGSFGVLTTSTCDKAFESIGSVDSESDNKGPSLRMSVMVCRVIAGRVLYSSLEEIEAVENYGFDSLAEKTSGDSEIEELYVLDARAILPCFVVIYKH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0830 444 ProSitePatterns Zinc finger C2H2 type domain signature. 188 209 IPR013087 -
Prci3g0830 444 Gene3D - 226 444 - -
Prci3g0830 444 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 46 442 - -
Prci3g0830 444 SUPERFAMILY ADP-ribosylation 228 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0830 Prci-Chr3 10538503 10540406 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0830 47 443 C2H2 Transcription Factor Family AT5G54630 37.393 5.18e-80 253