Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0765 ATGGCTTCTTTCTGGTGCCTCAAACTCCTCCTTAGATGCATTGATTTTCTTTCATGGCCCGTTCTTGCTTTGGCTTATCCCCTATGTGCTTCCATTGAAGCAATTGAGAATGATAGCCATTCAGACACTCGGAATTTGATGTCCTATTGGATACTTCTCTCACTGATATACCTCTTTGAGTATGCTTTTCTCCAGCTTCTTCAATGGTTTCCGTACTGGCATTACATGAAGCTAATGATTGTTGTTTGCCTCATGACGCCGGACTTTGGAAGAGCTGCTTATGTCTATAATTACCTCATTCGTTCATGTCTCTACATGAATCCACAGGCTGTCATAAGCAGATTCAGCGACTGGAAGAAGATATTTGTCGAGAAAGAAGACTTTCTAATGCAGGCCGAGAAGTACATAACACAGAATGGAACTGAAGGCTTAGAGAAACTCATTGCTAGCAAGGCTAATACAGCCTTGTGCAGCGTCGACTCAAATGAAAGTACATCATCTTCCACTGCGAAAACCCAAAAAATCGCGGCAGACACAGAACGAGGAGCATATCCTGATCTTCATGCGTTTGAGAATGTACAAAAGGAGTGGACTTGTGCCATTTGCCTGTTGACAATGCATTCTGAAGCTAATTTGAATTCCCACCTACAAGGAAGGAAGCATAAGGCAGCTTGTGAAGCACTGAAAGCGAAGAAAACCGAAGCAAAGGCCGCGGCAACTGATGCAGGAAACGGAGCATCTCACCAGAGTTGTGTGTCTAATAATGTGCAGAAAGAGTGGACTCGTGACATATGCCAGTTGAGAACTGCTTCCGAAGCTAATTTGAATTCCCACCTGCAAGGAAAGAAGCATAAGGCTGCTTTTGAAGCACAGAAAGCAAAAGGCCTTCATGTTGCTGAGAAAGTTTTGCTGAAGAAGAATGACAAGTCCAATGGAGAACAAGAGAAGATAATCAATACTTCATATGCATTAGAACAGAAGATCACAACCAATCACTTGGCCCAGAGTCAAATTCCTGCCTCCTGTTTGGGCTCCCCTCCCCTCCCCTTCCCTCCCCTTGGCTGGATGGAGCGAGCCCCTTCCCTCCCCTCCTCTCCAAACCCTCACCTCCCCATCAGAGAGATTTGGTGGGATTCCTCCCCCTCGCTTCCCCTCCCCTTCCCTCCCTTCCCCTCCCCTTCATTAAACTCCTTCTCATGCCCTCCGCTTTCCTCCAACCAAACATGTTACAGGCCTAGCTAG 1242 0.463 MASFWCLKLLLRCIDFLSWPVLALAYPLCASIEAIENDSHSDTRNLMSYWILLSLIYLFEYAFLQLLQWFPYWHYMKLMIVVCLMTPDFGRAAYVYNYLIRSCLYMNPQAVISRFSDWKKIFVEKEDFLMQAEKYITQNGTEGLEKLIASKANTALCSVDSNESTSSSTAKTQKIAADTERGAYPDLHAFENVQKEWTCAICLLTMHSEANLNSHLQGRKHKAACEALKAKKTEAKAAATDAGNGASHQSCVSNNVQKEWTRDICQLRTASEANLNSHLQGKKHKAAFEAQKAKGLHVAEKVLLKKNDKSNGEQEKIINTSYALEQKITTNHLAQSQIPASCLGSPPLPFPPLGWMERAPSLPSSPNPHLPIREIWWDSSPSLPLPFPPFPSPSLNSFSCPPLSSNQTCYRPS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0765 413 SUPERFAMILY beta-beta-alpha zinc fingers 254 294 IPR036236 -
Prci3g0765 413 Pfam TB2/DP1, HVA22 family 27 102 IPR004345 -
Prci3g0765 413 PANTHER HVA22-LIKE PROTEINS 20 138 IPR004345 -
Prci3g0765 413 Pfam Zinc-finger of C2H2 type 197 221 - -
Prci3g0765 413 Pfam Zinc-finger of C2H2 type 263 284 - -
Prci3g0765 413 Gene3D Classic Zinc Finger 232 292 - -
Prci3g0765 413 Gene3D Classic Zinc Finger 172 227 - -
Prci3g0765 413 SMART ZnF_U1_5 194 228 IPR003604 GO:0003676|GO:0008270
Prci3g0765 413 SMART ZnF_U1_5 257 291 IPR003604 GO:0003676|GO:0008270
Prci3g0765 413 SUPERFAMILY beta-beta-alpha zinc fingers 188 232 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0765 Prci-Chr3 9719098 9759640 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0765 185 317 C2H2 Transcription Factor Family AT2G19380 27.027 9.88e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0765 - - pcin:129306216 342.428