Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0764 ATGGCTTCTTTCTGGTGCCTCAAACTCCTCCTTAGATGCATTGATTTTCTTTCATGGCCCGTTCTTGCTTTGGCTTATCCCCTATGTGCTTCCATTGAAGCAATTGAGAATGATAGCCATTCAGACACTCGGAATTTGATGTCCTATTGGATACTTCTCTCACTGATATACCTCTTTGAGTATGCTTTTCTCCAGCTTCTTCAATGGTTTCAGTACTGGCATTACATGAAGCTAATGATTGTTGTCTGCCTCATGACGCCGGACTTTGGAAAAGCTGCTTATGTCTATAATCACCTCATTCGTTCATGTGTCATCATAAGCAGATTCAACAACTGGAAGAAGATATTTGTCGAGAAAGAAGACTTTATAATGCAGGCTGAGAAGTACATGACACAGAATGGAACTGAAGCGTTAGAGAAACTCATTGCTAGCAAGAGCACAGAGCAAAGTCTTAATGCAGAAGCAAAAAAAGCAGTTCCAACTACTGAGAAGAATGAAATCCTGAAGACAAATATAGGGATGCTTCACATGGAACAGGAAGATATCAAAGATTTGGAGATGATTGAAGAAGAGGAAGTTTCTGAAGTCAAACAAGCTAATACAGCCTTGTGCAGCCTCAAATCAAATGAAAGTACGTCATCTTCCACAGTGAAAACCCAAAAAATGGCGGCAGACACAGAAGGAGGAGCATATCCTCAGATTTCTGCACTTGAGAATGTACAAAAAGAGTGGACTTGTGCCATATGTCAGTTGACAATGCCTTCTGAAGCTAATTTGAATTCCCACCTGCAAGGATGGAAGCATAAGGCTGCTTGCGAAGCACTGAAAGCGAAGAAAACTGAAGGAAAGGCAGCGGCGACTGACTCAGGAAACAGAGTATCTGATCAGAGTTCTGTGTCTGATGTACAGAAAAAGTGGACTTGTGATATGTGCCAGGTTAGAACTACTTGCGAAGCAAATTTGAATTCCCACCTGCAAGGAAAGCAGCATAGGGCTGCTTGCGAAGCACTGAAAGCGAAGAAAACCAGAGGAAAAGCGGCGGCAACTGACACAGGAGACAAAGCATCTCATCAGAGTTCCAGGTCCAAGAATGTACAGAAAGAGTGGAATTGTCAGAAGAACACTGGAACTTCAGTTGGAATGAACAGTTCCAGATTAAGATGTTACACGTGTAATGTAAAGTGCACAAGTGAAGTCGACTTGGCTTCTCACTTGCGGGGCAAGAAACACTTGGCTCAAAGCCAAATTCTTGGTGATCCGAGCTAG 1266 0.4273 MASFWCLKLLLRCIDFLSWPVLALAYPLCASIEAIENDSHSDTRNLMSYWILLSLIYLFEYAFLQLLQWFQYWHYMKLMIVVCLMTPDFGKAAYVYNHLIRSCVIISRFNNWKKIFVEKEDFIMQAEKYMTQNGTEALEKLIASKSTEQSLNAEAKKAVPTTEKNEILKTNIGMLHMEQEDIKDLEMIEEEEVSEVKQANTALCSLKSNESTSSSTVKTQKMAADTEGGAYPQISALENVQKEWTCAICQLTMPSEANLNSHLQGWKHKAACEALKAKKTEGKAAATDSGNRVSDQSSVSDVQKKWTCDMCQVRTTCEANLNSHLQGKQHRAACEALKAKKTRGKAAATDTGDKASHQSSRSKNVQKEWNCQKNTGTSVGMNSSRLRCYTCNVKCTSEVDLASHLRGKKHLAQSQILGDPS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0764 421 SUPERFAMILY beta-beta-alpha zinc fingers 378 415 IPR036236 -
Prci3g0764 421 Pfam Zinc-finger of C2H2 type 306 330 - -
Prci3g0764 421 Pfam Zinc-finger of C2H2 type 387 410 - -
Prci3g0764 421 Pfam Zinc-finger of C2H2 type 244 268 - -
Prci3g0764 421 SMART ZnF_U1_5 383 417 IPR003604 GO:0003676|GO:0008270
Prci3g0764 421 SMART ZnF_U1_5 303 337 IPR003604 GO:0003676|GO:0008270
Prci3g0764 421 SMART ZnF_U1_5 241 275 IPR003604 GO:0003676|GO:0008270
Prci3g0764 421 ProSitePatterns Zinc finger C2H2 type domain signature. 388 410 IPR013087 -
Prci3g0764 421 Gene3D Classic Zinc Finger 353 415 - -
Prci3g0764 421 Gene3D Classic Zinc Finger 282 336 - -
Prci3g0764 421 Gene3D Classic Zinc Finger 216 274 - -
Prci3g0764 421 SUPERFAMILY beta-beta-alpha zinc fingers 295 342 IPR036236 -
Prci3g0764 421 SMART c2h2final6 244 268 IPR013087 -
Prci3g0764 421 SMART c2h2final6 386 410 IPR013087 -
Prci3g0764 421 SMART c2h2final6 306 330 IPR013087 -
Prci3g0764 421 PANTHER OS06G0651300 PROTEIN-RELATED 287 415 - -
Prci3g0764 421 MobiDBLite consensus disorder prediction 345 361 - -
Prci3g0764 421 ProSitePatterns Zinc finger C2H2 type domain signature. 246 268 IPR013087 -
Prci3g0764 421 SUPERFAMILY beta-beta-alpha zinc fingers 233 280 IPR036236 -
Prci3g0764 421 MobiDBLite consensus disorder prediction 345 368 - -
Prci3g0764 421 Pfam TB2/DP1, HVA22 family 27 102 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0764 Prci-Chr3 9719089 9723455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0764 243 417 C2H2 Transcription Factor Family AT2G19380 26.087 1.99e-11 63.9