Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0763 ATGGCTTCTTTCTGGTGCCTCAAACTCCTCCTTAGATGCATTGATTTTCTTTCATGGCCCGTTCTTGCTTTGGCTTATCCCCTATGTGCTTCCATTGAAGCAATTGAGAATGATAGCCATTCAGACACTCGGAATTTGATGTCCTATTGGATACTTCTCTCACTGATATACCTCTTTGAGTATGCTTTTCTCCAGCTTCTTCAATGGTTTCAGTACTGGCATTACATGAAGCTAATGATTGTTGTCTGCCTCATGACGCCGGACTTTGGAAAAGCTGCTTATGTCTATAATCACCTCATTCGTTCATGTGTCATCATAAGCAGATTCAACAACTGGAAGAAGATATTTGTCGAGAAAGAAGACTTTATAATGCAGGCTGAGAAGTACATGACACAGAATGGAACTGAAGCGTTAGAGAAACTCATTGCTAGCAAGAGCACAGAGCAAAGTCTTAATGCAGAAGCAAAAAAAGCAGTTCCAACTACTGAGAAGAATGAAATCCTGAAGACAAATATAGGGATGCTTCACATGGAACAGGAAGATATCAAAGATTTGGAGATGATTGAAGAAGAGGAAGTTTCTGAAGTCAAACAATTTTCAACATTGCAGGCTAATACAGCCTTGTGCAGCCTCAAATCAAATGAAAGTACGTCATCTTCCACAGTGAAAACCCAAAAAATGGCGGCAGACACAGAAGGAGGAGCATATCCTCAGATTTCTGCACTTGAGAATGTACAAAAAGAGTGGACTTGTGCCATATGTCAGTTGACAATGCCTTCTGAAGCTAATTTGAATTCCCACCTGCAAGGATGGAAGCATAAGGCTGCTTGCGAAGCACTGAAAGCGAAGAAAACTGAAGGAAAGGCAGCGGCGACTGACTCAGGAAACAGAGTATCTGATCAGAGTTCTGTGTCTGATGTACAGAAAAAGTGGACTTGTGATATGTGCCAGGTTAGAACTACTTGCGAAGCAAATTTGAATTCCCACCTGCAAGGAAAGCAGCATAGGGCTGCTTGCGAAGCACTGAAAGCGAAGAAAACCAGAGGAAAAGCGGCGGCAACTGACACAGGAGACAAAGCATCTCATCAGAGTTCCAGGTCCAAGAATGTACAGAAAGAGTGGAATTGTCAGAAGAACACTGGAACTTCAGTTGGAATGAACAGTTCCAGATTAAGATGTTACACGTGTAATGTAAAGTGCACAAGTGAAGTCGACTTGGCTTCTCACTTGCGGGGCAAGAAACACTTGGCTCAAAGCCAAATTCTTGGTGATCCGAGCTAG 1281 0.4262 MASFWCLKLLLRCIDFLSWPVLALAYPLCASIEAIENDSHSDTRNLMSYWILLSLIYLFEYAFLQLLQWFQYWHYMKLMIVVCLMTPDFGKAAYVYNHLIRSCVIISRFNNWKKIFVEKEDFIMQAEKYMTQNGTEALEKLIASKSTEQSLNAEAKKAVPTTEKNEILKTNIGMLHMEQEDIKDLEMIEEEEVSEVKQFSTLQANTALCSLKSNESTSSSTVKTQKMAADTEGGAYPQISALENVQKEWTCAICQLTMPSEANLNSHLQGWKHKAACEALKAKKTEGKAAATDSGNRVSDQSSVSDVQKKWTCDMCQVRTTCEANLNSHLQGKQHRAACEALKAKKTRGKAAATDTGDKASHQSSRSKNVQKEWNCQKNTGTSVGMNSSRLRCYTCNVKCTSEVDLASHLRGKKHLAQSQILGDPS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0763 426 SUPERFAMILY beta-beta-alpha zinc fingers 238 285 IPR036236 -
Prci3g0763 426 MobiDBLite consensus disorder prediction 350 373 - -
Prci3g0763 426 Pfam TB2/DP1, HVA22 family 27 102 IPR004345 -
Prci3g0763 426 ProSitePatterns Zinc finger C2H2 type domain signature. 251 273 IPR013087 -
Prci3g0763 426 SMART c2h2final6 311 335 IPR013087 -
Prci3g0763 426 SMART c2h2final6 249 273 IPR013087 -
Prci3g0763 426 SMART c2h2final6 391 415 IPR013087 -
Prci3g0763 426 SMART ZnF_U1_5 388 422 IPR003604 GO:0003676|GO:0008270
Prci3g0763 426 SMART ZnF_U1_5 308 342 IPR003604 GO:0003676|GO:0008270
Prci3g0763 426 SMART ZnF_U1_5 246 280 IPR003604 GO:0003676|GO:0008270
Prci3g0763 426 SUPERFAMILY beta-beta-alpha zinc fingers 383 420 IPR036236 -
Prci3g0763 426 Gene3D Classic Zinc Finger 287 341 - -
Prci3g0763 426 Gene3D Classic Zinc Finger 358 420 - -
Prci3g0763 426 Gene3D Classic Zinc Finger 221 279 - -
Prci3g0763 426 PANTHER OS06G0651300 PROTEIN-RELATED 301 420 - -
Prci3g0763 426 ProSitePatterns Zinc finger C2H2 type domain signature. 393 415 IPR013087 -
Prci3g0763 426 MobiDBLite consensus disorder prediction 350 366 - -
Prci3g0763 426 Pfam Zinc-finger of C2H2 type 392 415 - -
Prci3g0763 426 Pfam Zinc-finger of C2H2 type 249 273 - -
Prci3g0763 426 Pfam Zinc-finger of C2H2 type 311 335 - -
Prci3g0763 426 SUPERFAMILY beta-beta-alpha zinc fingers 300 347 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0763 Prci-Chr3 9719089 9723455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0763 248 422 C2H2 Transcription Factor Family AT2G19380 26.087 2.07e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0763 - - pcin:129306216 615.535